IMP, gene5905 (gene) Nannochloropsis gaditana

Overview
NameIMP
Unique Namegene5905
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:606363..607903 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100062g32
Gene biotypeprotein_coding
GeneIMP
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:606363..607903 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02320NO14G02320Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6113rna6113-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6113rna6113Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6113

>rna6113-protein ID=rna6113-protein|Name=rna6113|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MPGGKRDVLTDLALVTAGASTAIGVYWGLTKLQRRYWRLKGKAKARIPSA
LFKSEWAREIHIATQAALSAGVNLKACSEKDPTSKCVSHKGEIDLVTETD
KENEREIVALLRKHFPSYLVIGEEEASDAGAIPPLTRAPTWIIDPIDGTT
NFVHGCPLSCVSIALAVDKAVVVGVIYDPFKDELFLAARGRGSYLNGKPL
QTAGGTHELHQAVIIQEFGYERSEAGIRKLLQVSERLLRGNVQALRQFGS
GVLDLAYVAAGRVDGVYCGVAGDGWKPWDYAAGSLVATEAGATMSTLQGQ
EFDVFGSSMVCAANESIARKLVGAARE
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Synonyms
Publications