Naga_100062g4, gene5882 (gene) Nannochloropsis gaditana

Overview
NameNaga_100062g4
Unique Namegene5882
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:541117..543288 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100062g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:541117..543288 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02050NO14G02050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6088rna6088-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6088rna6088Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6088

>rna6088-protein ID=rna6088-protein|Name=rna6088|organism=Nannochloropsis gaditana|type=polypeptide|length=723bp
MSSSTGKRNVSPSKDANGSAAKKGKQSLVTPLSTKAVNTVRVLCADMVQK
ANSGHPGAPMSLAPLAYLLWTQVMKYNPKDPQWLARDRFVLSNGHACALL
YAMLHLTGYAQVTMDALKAFRQVDSITAGHPENTLIKGVEVSTGPLGQGI
SNAVGLAMAEMHLGAVFNKSGHAKIVDNYTYVICGDGCLQEGVSSEASSL
AGHLGLGRLIVFYDDNQITIDGDTALSFTEDVAKRYEAYGWHVQTLEDVQ
DLDALLAATEAAKAETDRPSMIKIRTRIGFGSKKEGSHSVHGSPLGAEDL
KQLKSRFGFDPEQAFVVPTEVAELFQAAGAKGAAAQAAWNTAMEAYKGAF
PAEASELVRCTEHRLPEGWREKLPRYTPEDKAMATRKFSEIALNVLAPML
PELVGGSADLTPSTLTALACSGDFQKKTPDGRYVRFGVREHGMTALANGM
FAYGALRPFVATFLNFIGYAWGAVRLSCLSHLGVIFVMTHDSIGLGEDGP
THQPVETLEQIRAMPNLHLLRPADGNEVSGAYISALEHPYTPSVLALSRQ
NLPNLEGTSAEKTLLGAYVLAEMGGSNGGGGAPELILTGSGSEVAIAVEA
AKTLAETVRVRVVSFPSWELFDQQNKEYRLSVFPAGVPVVSVEASATHGW
AKYSHAALGLTWFGASGPYAKVYAKYGLTADNLVSKAREVLAFYAGDRQV
PSLIDVPFISKQLDHKPVATSHA
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Synonyms
Publications