TOP4B, gene5869 (gene) Nannochloropsis gaditana

Overview
NameTOP4B
Unique Namegene5869
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:509652..512653 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100171g16
Gene biotypeprotein_coding
GeneTOP4B
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:509652..512653 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0016043cellular component organization
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL025ngnoL025Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01780NO14G01780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6073rna6073-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6073rna6073Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6073

>rna6073-protein ID=rna6073-protein|Name=rna6073|organism=Nannochloropsis gaditana|type=polypeptide|length=825bp
MTARKGKARYAIETQTRGNLGFVAVVDRASNEWSSLFFTFNSCDTNFLDV
KHRVRGQDIGLSNPWMVSRLPSRLSVVAASICFTTDMLSRPLGGMALVML
RLIGGWSGVRVFGFPTSSYPRLSGLSALASTRVSSDSQRRAFSVKPTANR
RRRTVGMEATSIAPPPLPSMSSPPSTPVGGSYGADKITVLEGLEPVRKRP
GMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGEDGSVTVSDD
GRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSV
VNALSESLTATVRRDGKVHIMRFARGKPLGEMEINPDPDAVTGSSASGTS
VRFKPDAEIFKTSTTFEFDRVSGRLDELAYLNAGIRIVMTDERGEGRRQE
FFHEGGIREYVQLMCSSKEELHPDVAVIHAAGEKNGVAVEAALRWSKDQY
DDLLIGFANGIRTGDGGTHLDGLKSVLTRTINSMARKAGKLKDGKDNLTG
DFVREGLTAIVSVKVPDPEFEGQTKNRLGNPEVRGIVDTIVGESLVNTFE
WNPRVLGAIVDKAMSAQQAAQAAKAARDMVRRKSLLQTTVLPGKLADCSS
RDPGESEIYIVEGDSAAGSAKQGRDRRTQAILPLRGKILNIEKAATEKIY
QNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLT
FLFRYQRALVERGYVYIACPPLYKVTQGKTVKYAYSQEELAEVQSSFKGK
TALSLQRFKGLGEMMPVQLWETTMNPATRILKQVTIEDAAEADKMFMLLM
GDAVGPRKDFINRNADALRLDDLDF
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Synonyms
Publications