Naga_100055g6, gene5843 (gene) Nannochloropsis gaditana

Overview
NameNaga_100055g6
Unique Namegene5843
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:441126..445506 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100055g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:441126..445506 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL025ngnoL025Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01710NO14G01710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6048rna6048-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna6049rna6049-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6048rna6048Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna6049rna6049Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6048

>rna6048-protein ID=rna6048-protein|Name=rna6048|organism=Nannochloropsis gaditana|type=polypeptide|length=412bp
MTDLVAEYGYASEGETFTVADPEEVWVLEMIGKGEHGKGAVWAAKRIPDG
YISAHANQARIQTLESEGIDQVLFSDDVIDFARRIGRFPTEAQDDLFSFS
DVYNPITYLAARACEGRVWDFFRRATAADQSIMGPYLDYVTGRNLTKRMP
LYIKPVAPLSTSDIVDAMRSHYENTPLAFDQDVGAEAFGLPYRWRPLTWQ
LDDGRTFFNERAAATQQTGFSLLAQLRRGVPDPIKALQFFAVDDTDSSVM
IPVYGGMALVPPSYGPGSISVFEPEKAFWAFNMVANFAYARYAIINPDVR
RRQGALEAQQWKLAVEIDEEFTRLWGEDQIKAVAMMTTACVSNAESLVLE
WRRFYGELFVKFMDGNIKTKDNPEQLLPDVEQPGYRLEWRERIVRETGER
YRFPADMFTSQQ
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protein sequence of rna6049

>rna6049-protein ID=rna6049-protein|Name=rna6049|organism=Nannochloropsis gaditana|type=polypeptide|length=555bp
MPLLRFGGLFTLTLLCVLSMGESCTCFIVTPGASQVGAMQVTYAADSHTL
YGYLQFWPRSRHSDGEVINVTDWDSGLFRGVIRQVPLTYNVVGNVNEFGL
CITESTWGGLAELAHQPGAILDYGSLIYITLQRAASAQEALQVMTDLVAE
YGYASEGETFTVADPEEVWVLEMIGKGEHGKGAVWAAKRIPDGYISAHAN
QARIQTLESEGIDQVLFSDDVIDFARRIGRFPTEAQDDLFSFSDVYNPIT
YLAARACEGRVWDFFRRATAADQSIMGPYLDYVTGRNLTKRMPLYIKPVA
PLSTSDIVDAMRSHYENTPLAFDQDVGAEAFGLPYRWRPLTWQLDDGRTF
FNERAAATQQTGFSLLAQLRRGVPDPIKALQFFAVDDTDSSVMIPVYGGM
ALVPPSYGPGSISVFEPEKAFWAFNMVANFAYARYAIINPDVRRRQGALE
AQQWKLAVEIDEEFTRLWGEDQIKAVAMMTTACVSNAESLVLEWRRFYGE
LFVKFMDGNIKTKDNPEQLLPDVEQPGYRLEWRERIVRETGERYRFPADM
FTSQQ
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Synonyms
Publications