Naga_100173g10, gene580 (gene) Nannochloropsis gaditana

Overview
NameNaga_100173g10
Unique Namegene580
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1502612..1506799 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100173g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1502612..1506799 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL004ngnoL004Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL001ngnoL001Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G06000NO02G06000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna603rna603-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna604rna604-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna603rna603Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna604rna604Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna603

>rna603-protein ID=rna603-protein|Name=rna603|organism=Nannochloropsis gaditana|type=polypeptide|length=447bp
MDLDLAQTEDAHPLSPSSPAAGSDETKETSLGSQVSSTSLEDTEDVGNEK
QEGEKEKDKEEEEVEKEDVEGGSKREKREDILASSTGPAGPDTVETSHAS
KDTVQKQKNKKKKGGKSRKKREAQRRYGPPHLDRETIKRAKVSMRIIAFF
YHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLG
NLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILA
MLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNV
IYPLYISITLVIICVLICLSMAESLPPQNRHIKLEHSNPLWGLKKAMRYR
PFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAI
LQGNLRHIVPRFVSGKSLPPSWPSLPPLIPRLNMRLPTCLPLYTSLS
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protein sequence of rna604

>rna604-protein ID=rna604-protein|Name=rna604|organism=Nannochloropsis gaditana|type=polypeptide|length=447bp
MDLDLAQTEDAHPLSPSSPAAGSDETKETSLGSQVSSTSLEDTEDVGNEK
QEGEKEKDKEEEEVEKEDVEGGSKREKREDILASSTGPAGPDTVETSHAS
KDTVQKQKNKKKKGGKSRKKREAQRRYGPPHLDRETIKRAKVSMRIIAFF
YHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLG
NLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILA
MLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNV
VYPLYISITLVIICVLICLSMAESLPPQNRHIKLEHSNPLWGLKKAMRYR
PFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAI
LQGNLRHIVPRFVSGKSLPPSWPSLPPLIPRLNMRLPTCLPLYTSLS
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Synonyms
Publications