Naga_100076g9, gene5786 (gene) Nannochloropsis gaditana

Overview
NameNaga_100076g9
Unique Namegene5786
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:300202..301794 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100076g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:300202..301794 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0008135translation factor activity, RNA binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5989rna5989-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5989rna5989Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5989

>rna5989-protein ID=rna5989-protein|Name=rna5989|organism=Nannochloropsis gaditana|type=polypeptide|length=530bp
MVNPADLSVPAGGDPPVFDVAAAFQGLCDRSNEMSEEKFMATVEALEPWL
VPDIIDFLVAKIAGFGKEREPAISLLTKLDAAFVRRKLPDILQPVMNMCT
DTSKKVRELSLKCLEHLVQTNGNSDLDRVIPGLVQALKDPNHTVQAIDDL
ASCVFVQDVEAPALAVIMPIIRRGLRHKQTEIQRKSCVILDNVCRLVDDP
KELSIAIPEILPLVKSCAENISKPEAREVANRALKTILDHYDEKLVLRKW
SVEEVTAMIKKHGEPTEHIVKCTKNLCDAYHFEKKDWERVYGQKHAELCA
KVLNDCEILASPNTIIFEDTEEGQDLYKGEFSLAYGTLTLLRKTRLHLKR
NRFYGLLGPNNCGKTTLMRAIDHEQIEGFPKKTELKTLFVEHEIEEREVG
EDETGYPIFNTDLSGTDWVVDYCNNVVKLLPAITTEAAAAAMGEMGFGKD
RAADADMPVTTYSGGWKVKMQLVAAKLINTDLLMLDEPTGHLDVTNIAWL
KGWLKSFLRGGAPSSPPPTTRSSCRRCART
back to top
Synonyms
Publications