Atg4, gene5742 (gene) Nannochloropsis gaditana

Overview
NameAtg4
Unique Namegene5742
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:171307..172445 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_101405g1
Gene biotypeprotein_coding
GeneAtg4
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:171307..172445 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
GO:0019538protein metabolic process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL024ngnoL024Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5944rna5944-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5944rna5944Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5944

>rna5944-protein ID=rna5944-protein|Name=rna5944|organism=Nannochloropsis gaditana|type=polypeptide|length=323bp
SSLPFDPLLHRPPSVVAADERAAAKALPPPFRPWREGEGAVLLIPLRCVR
FHVGRWLGVYVGLWMCVSGFGRTFPPCKHGHCLPPTEPCPPSLPSSVPSS
LSLPLSLCPYLLPSLSLGLASLNPDYIPGLLASLQIPHSLGFVGGRPHHA
IYFVGAEGGREGGREGGAVVGLDPHTVQVAPGPQGDGDQGGQGGREGGKE
GGGEGRKEGGREGGRRRYRPTDEHLRSVQCRTPAMMLAKDLDPSLALGFY
LRNEVDFQLFIQHVHALKDTLQRHRLPVPFSVEQAPPEYEGAMMQSLVEE
EEHRVEEEEEEEEEDLEDDYVVI
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Synonyms
Publications