Naga_100173g2, gene572 (gene) Nannochloropsis gaditana

Overview
NameNaga_100173g2
Unique Namegene572
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1483008..1486119 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100173g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1483008..1486119 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL004ngnoL004Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL001ngnoL001Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G06090NO02G06090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna594rna594-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna594rna594Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna594

>rna594-protein ID=rna594-protein|Name=rna594|organism=Nannochloropsis gaditana|type=polypeptide|length=887bp
MRLSPREVDKLLLQQVGLLAQRRLARGLRLNHPECTALIATVLIEMMRDG
NKTCAELMDLGRCILGHRQVLPGIACMVEEIQIEGTFPDGTKLVTVHEPI
SRLDGELQLALYGSFLPIPSLDLFTPPSSAYLEGGEGKEEAEQEEEEALG
HFLTPPGATWNVNEGREITALRVTNMADRPIQVGSHYHFIETNPYLCFDR
ARAYGKRLNILAGTAVRFEPGETKTVALVEIAGKKVVRGGNSLCDGPVEA
GKIAGIVEGLMKKGFLHEPQDEGEEGAEGGKEDEGEGRKRRKTNVLAPLT
VCRAHYSHFYGPSVGDVVRLGDTALYVRVERDLTWPVGDECKFGGGKVIR
EGMGQATLETETCLETVLTNALVVDYTGIYKADVGLRGHRIVGIGKAGNP
DMMANVTPGMVIGVGTDVIAAEGMILTAGGMDAHVHFICPQQADDALASG
VTTFVGGGTGPSTGTKATTCTPAPAHVAFMLQSTDSIPLNIGLTGKGNTS
RPEGLEAVVEAGAIGLKLHEDWGTTPAAIDCCLGVAERMDVQVTIHTDTL
NEAGCVEHSIAAFKGRTIHTYHSEGAGGGHAPDIISVCGEPNVLPSSTNP
TKPYTKNTVDEHVDMLMVCHHLDSCIPEDVAFADSRIRGETIAAEDILHD
LGAISIISSDSQAMGRVGEVITRTWQTAHKMRLQRGQLQEDQEREEEWTR
QEEGNGWALPPGVTTENFRVRRYVAKYTINPAIAHGMSHVIGSVEVGKWA
DLVLWSPAFFGAKPEMVLKGGVVAWSQMGDANGSIPTPEPVIMRPMYGAT
PGGLGEACLAFVSQKSVETGRASALGLRKRVEAVRGNRMVGKRDMKLNDA
LPKIKVDPETFRVTADGVHLTCEPLEVLPLAQRYYLF
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Synonyms
Publications