Naga_100255g3, gene5712 (gene) Nannochloropsis gaditana

Overview
NameNaga_100255g3
Unique Namegene5712
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:85345..88219 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100255g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:85345..88219 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004518nuclease activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00260NO14G00260Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5917rna5917-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5917rna5917Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5917

>rna5917-protein ID=rna5917-protein|Name=rna5917|organism=Nannochloropsis gaditana|type=polypeptide|length=584bp
MDDNTEEVINDSTVEIKLPTAQSEKIGANEPVEQLQRPTWTEKGKNDFVQ
RLPEEALSCSTHSTPLQQGNPTKINDEILSADPGNDPSLKKRERCEEMED
KDDLIPKKRPKEFKTWFPSSAHISTAVPVAVMPSALSLMVDEGILRMGEE
APRADTDYFDKRVVDAAAVRAIEEEREENKRRRLEVARQRAAEEQRALAA
AMGASPSLPPSLLPSLPPSSRRFTGEARGGEREAGGKGNEEGCQGVEENA
GEEGGESGDRSDEEGEERGGREKGEGLMGRSGGEKGREQGEGAAEEEGQG
GGKESSGKEEMVVEEASTAAPPAVENGAHADLTRTPPASSSLPPSLPPSF
LSDSSSSSHPSSLNGPGTARLPPPSAFAHLEQVASQHLLPPRPLSNPPSI
PPSLPLVRGLADMSGYHSLEERMLRAVYRDLWERGLTIGSGGAYGADFTA
YEGDPMAFHSFAAIIVLPASSPLSARALSASVRLEQSVVKLLVYAVCHRR
EGEEEHMEGRGEKRTGEGGENGGEEREKDVRMETSTFAEGKGKEGDVGTR
AAITRFGWPRRSYVGGFMIEYMTLRFISVTRRME
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Synonyms
Publications