Naga_100092g9, gene5574 (gene) Nannochloropsis gaditana

Overview
NameNaga_100092g9
Unique Namegene5574
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:795505..800103 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100092g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:795505..800103 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02890NO11G02890Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5770rna5770-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5770rna5770Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5770

>rna5770-protein ID=rna5770-protein|Name=rna5770|organism=Nannochloropsis gaditana|type=polypeptide|length=1456bp
MERRRRREPPTVIFGSMDEEDGVEEEGMKEHGEDEEEEEEEEEEEEEGED
SGLMGLLNPLARMPEPGDLSWSFTSIYRTGTPTPRDGHPPAPATPGREGV
GPSSSGVGLAVAPSSPGGSFRGGMRFPPPSPPKYLYIQMEYCAQTLRDLI
DEGKLWASLPQCWRLLRQMLEALVYIHKKGIIHRDMKPANVFLDGEGNVK
VGDFGLATTRARGGGGREGRHVGGRGWVVGSGEDDSQGRGNSTDGGTGGR
GEGRDGRGDAVGVEDRGAGAGVPERSREEGGWEEGSGSITGGVGTYFYIA
PEQQLLTSGPRSGRYDTKADLYSLGIIFFEMTHPPFATMMERAKTLTALR
TTQELPSEYLARVPPLVAKVIQQLVDPSPSLRPSAAAFLASGDLPGKMEV
EEVYLKEALATLTNPQSLSYRRLVRALFAHGNPPEVDATWDLEWMAAQKE
EMTARVLARREAVSDYVKTVFQLHGALPVSVPLLRPTPAALGGRAGTPGA
RAGREGELVPAHRRHHQEGGREGGGTGGGEGQGVDVLDAEGAVLRLPSDL
LVPFARYVARTEVSHLKRYEVSRIFHGPDQGAGHPQEEWAAQLDVVCDGR
HTPGQGEILEAEVVWTAGQVVEGIVGRPYVLRLNSAPLLQGTLELLDVPL
EARKPVLNLLEAVCMGALAHPKAVAAALEGVVGFTAEGGEGGARGGKSAT
GSNASEGEGLRSTREVNVRAATLQQRQQQHQYALQESKEGVKRLLNSLLS
AGNDPYMRLQAVEDVLSALPQVQAVLIPPEGGSGVGRGEGGGPGRVRSGQ
FHASRKEMKRLRLACKTVSDALLSLRTLFHYLHALGMLVVPAASSPTPTG
LSSSPPSSLSGVEKGGVGGRISTPSINPSLDNPNQNPGLNPLQTHHRRVG
TRQGGGDGRRALHTSVPGPWMREKCGGVTGDTPQTFSMSPKEPKHLMEAS
LLAGAQGGKGPVECKHAPLALVFDMGLHRRKSHYTSGLIFQVLVPPTLGK
EFASLFPPRAPQASSEAPPTPSQSASASYSRQATGASHRYLRYCVIEGGR
YDSLILEHRSPAQWASPLLLAMGMTVSIEKLTRPHSSKGLLPLSVDAIPR
LPSCAGPPDVLICSTASGLGAGGMADRLLVACVLWNRGVKAEYFPQDLWR
KGREGGRVEMSVEDATRVCLAMGIPFLVMVKAHVLRDKRAVKLRAVREAG
VSDATVPLLQLARHILDRIPSPGGGGFSGGGGGGSGEKGWPYHVDTSALD
HGPAGYYQHSYNAHGGVGGGGVGGGIAGGGGGGGGVEVKLSYLDSKLSQY
APGADRRKAYKEMTALERRVRSHLERMVGHPFVGSGPQREAVVVLAVEMP
YIVIRVFCTAYLRVGPEEALRDPWVSQHCGPYKKGLRSLADALEEEEKKQ
GRGIGQGRKGGGIAGGGGGGGNVYVYSVVEDCCDVVQLTGGRFDRRFEAR
GREKVK
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Synonyms
Publications