Naga_100186g8, gene5520 (gene) Nannochloropsis gaditana

Overview
NameNaga_100186g8
Unique Namegene5520
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:656191..658980 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100186g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:656191..658980 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02390NO11G02390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5715rna5715-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5715rna5715Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5715

>rna5715-protein ID=rna5715-protein|Name=rna5715|organism=Nannochloropsis gaditana|type=polypeptide|length=891bp
MAPTGMGRTGKSGNSNVMPTLRTSAEGPPSTRSNTTKMAGTISKLDAEAF
EKASKIIKKKFCEQVQLDDLPELRNDYKKKLSSLELQLSGMVQVKLDGVK
RSMDVIQTANDQMVAVRGEFEGMYELCRKAGEQGKVLFDAYPRLKMINRA
RKNLERTLKEVTYYANLPARVDHLVGLLEKQPMQLRQVHLEGQQLELWRD
ELLRELKVQQGSKTMAPPPSKSGIGGPSRVVSVGDRMQATFGIHLEEVKK
LLDAIRKKIFDNISNCFEIVQLDPRILTSTLEIVDMHAAFQKQKATRARE
RAEKNSEDVEEAVALSLLEDLRADLMSKLKQRVDDRASVMFAQTQAEAIA
KEASVTTAGDASHVQPDVFAATLGAATRILVDLNYLKAEVAPCFPDDYMV
MDTFRMQYERCLVKEICKLYQGGFSKLDQGELLQLMEWLDYYNQAIVHLG
ARTPCSEFVQALSICLQEYLVRVRIQMTEWFTNILNRVQEVAVNSAGQPI
TSTPEDFFNIIHLQVLVALSKLSADNMCAVIVVCLNVIKTILEETLTTLR
DKKLELAFPPTMAKERQREGDPVTLEMMCATVNDYDRLQEKIQEFREELG
LMGKLSEEHLVMVDAAVDHVLDGFVSIADEANSGCTQLVLEDVREAFAEE
LFTAEWEDSVDVMMQKVAMTFHDYYSDLSVWLPPFYFARLVKECLEKVMA
LYLFFLFRRGGAKGKDEKAVVKSRPFADPLVVAQKLRNDREAMAIFFDDY
EEQLRIAGLREPAALELQLAVLDHIVDLFEGGVTLETDATDALLREFGPW
GVDALLAISFLRGDKDKTGLDLKERLKRHCARTIRPTLRGAGGQAGLSNF
TYDGAAEAPRNFSARFSLSPFDSEVDAEAIVIGVKRLKAKK
back to top
Synonyms
Publications