Naga_100098g15, gene5430 (gene) Nannochloropsis gaditana

Overview
NameNaga_100098g15
Unique Namegene5430
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:417106..421180 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100098g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:417106..421180 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL019ngnoL019Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01470NO11G01470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5618rna5618-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5618rna5618Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5618

>rna5618-protein ID=rna5618-protein|Name=rna5618|organism=Nannochloropsis gaditana|type=polypeptide|length=992bp
MEKLPAAAACGGIRLGAAQDVQLPRERKRRRPGTMLCRGVEDSRTDRKCE
PHAILTVDSAVTSDISLTDVCSSHSACWNDSSLEEWRGGGLVPGRLPPSA
RKSGSPFLCRAQRGKSFTSCVLSSPVLVLLVLLVPLRLVEAFTFLPQLPT
CRHHFFFHPADPPPPGSSPLSTIVNLAAGGESGGAGPEEHMPGGASLVDL
ARRRFWRWTVWRRLYHSSVATVLKQQASVAAYLPSINRRRSGHDSTYTKP
RPFLFSAPDAGPVTVASSSCAFNAVHLVTRAAAPEQKSLIYVNGTEVSGH
LRLGGVAPTPSPRRSRRRDGQGTGTMTERTASAQGVLDPKAPLSLSLVGE
FCIDKPAYLHIAPTKAGAMPLLWVTQFSITRRGSVSGINIFGQAHAPDPT
ASPLPLPPAFPPTSLSTQAPAARSSASVSSQVQPPPPSSLLLQDQSPADM
PIARPRSPAPGTEPIHPNPAPEEIKLGFSFRWPNEVYNLPPNTIAGVSEE
ALLVADGFLMPGRSDGGLYVVQQPGTSLERVTSLTRHRPGWFYHKATWVD
LLGPGGRPCLLTARATKPFFAQTEGELVLLLQPEGPFPLAEWNTPWQEVV
LAKGPDVMFDVADLDPTDDVLEVFASEFFSRRLSLHRIIKGDWRTGRLPR
VLTSEVLDDALGPAYSVVLADLRGQGRPSHVLVSSHECQYEGLVEGGSVK
EGGRGSGRQTRDERLRREAAAYAEGKETEARRSKDPLGFSGAGPILESVG
LTGASGRALSDGVDGGREDTEGQDGAGRAADEGAALNGGSLFAYEIPPDW
RQRACWKRSTLATGFHVKNWGQINPGAPGFPYVFYPHRSLRGQPGQRPYI
LLAGDCSHAAYIYRPVLGRDGGGGDEAEVQYEPMAQINCGGTVGSLAVGH
LPLAVGESEEWEEDDDGWAKIFIPNFDTDKVYAFSFGPEKVSFLSGLSPP
SVPSEPHLKLEAERKARVAEEDEIVNGINSYAKTRGEKTKIG
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Synonyms
Publications