Naga_100005g130, gene5152 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g130
Unique Namegene5152
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:734703..737117 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g130
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:734703..737117 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL017ngnoL017Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01210NO10G01210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5331rna5331-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5331rna5331Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5331

>rna5331-protein ID=rna5331-protein|Name=rna5331|organism=Nannochloropsis gaditana|type=polypeptide|length=569bp
MSSSPPVHYGATASLPYSDYNHEDDYLSVDAEEGRRRRDEEETTPTAPSS
STSSLMRQYQTSGYHSDSAIPTQSHMTPNRRRRTSSREMLDPAAEPLIGT
DIDESDRERDGRHHHLHSPSMNHGRESYEDGNGFAVQSMLDFDQFRSPLE
EWVQPRKPRWNRKVTRKKTKKPTIAVRKGRLAVYCIASELQTDQIQRYLL
QRKKEMVPVDKGGHKGKGAGGDGGGGGYYGTNGGKAGSQHSYFAPPAPPT
LSTTNSSSLLLPVPKKKEGGRGSHIAARCKSFLRATANAAVSGVKAAPPS
QSAKVDTSDLVGLNWRDKNFMGVIYTTDDDGKCDPLEVKHIFCFPYGCTV
FWGCTKEEEERFISMLTPFAVELVSDMEREESYDDFAYFYGSSPQILHYE
ITLTSNDPEEKLALSFSLAQSAKLFVFEDRVDGTITSTKHIPIHLAEFGK
TNVSRKEISKLTGKVFLERNEINLHSDILDTPEWFWEADLWEPRYVGLCK
YLDLPNRVNILNKRLDILRELLNVLETQLDNSHSTKLELIVIALIIVEVV
LQVLEIALNDLLHLNRNAF
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Synonyms
Publications