Naga_100005g119, gene5142 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g119
Unique Namegene5142
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:710271..711948 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g119
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:710271..711948 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL017ngnoL017Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01330NO10G01330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5322rna5322-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5322rna5322Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5322

>rna5322-protein ID=rna5322-protein|Name=rna5322|organism=Nannochloropsis gaditana|type=polypeptide|length=314bp
MAAHSRAPVNADGGGGGHREEGEARGRGAEECGKESEGAAWGGERGAARY
HRREGGVATGGAKDLTGSVAEAVGEASESEAGMGPGSTLLGADAANLQRF
RLLVAVILSSRTQEQIVRQAMETISREYPGPRFSPDSFAALPSSEALSEK
LSFVHCNKVKSKHILQSAATIQTEFGGRVPGRREGLLRMAGIGPTLAPLL
EFLFTRLDEGDKAVGNWVWKAKKAGWDGEERGNSNDVVDRKGDEEAKDGG
SRRSDRIGAAGGRAMSDEEANVEQQGTRGREGQWELRELELHGYVSGREH
GRSQRVADVVVIED
back to top
Synonyms
Publications