Naga_100005g113, gene5137 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g113
Unique Namegene5137
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:696795..699214 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g113
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:696795..699214 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL017ngnoL017Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01390NO10G01390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5317rna5317-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5317rna5317Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5317

>rna5317-protein ID=rna5317-protein|Name=rna5317|organism=Nannochloropsis gaditana|type=polypeptide|length=691bp
MSSKSDAYKRRQKNRLLRKYGDIFKLLLATLTSVMSGSFAWSRPGSKSLS
CKQETSTSKKKQRYQLLGVLLPLFLTLSRPLQIHGFHASLFGQRHWRSSQ
KHMLFLLSKSNSITLLHDISQHRSRKSMSTFPFSSLPSGTPLFSINDEKD
FHAASSNFEKALEDDINKTKENPIELLYSTHMLEDFWDELPDEKLYLLLD
KLRILEKETSGIGSDVGQDATLKRFSDYCQNRQRHIDIQSTLISPDPNGL
FAQLRASWRNSESHGVENFQSIVTTRLNALQMQDLAQIVHKTLSSTSSLS
RQRIPPSLTDLLLETITARVRANSSPSSPSLPGSTWVRLLQASSSLSPAV
KARLAGQQFRQALVLDLPHRLSSLAPADLALAVQIWPRPPAHLDAFSRRL
IQAILAQSIDSLHRFKPLELVQLLRGLRRPMTRDRRTTIEALDAARLETP
DVNNRQRLIKAATKQLARRVEELGPDDLSAFMQMCVTDLTFEDWARDLGV
AFPRAYTRAVFKHIPAMRPLQLLPVLSAFLFLHTVFHFSAGTDYYRRLEN
LVLASFEKNGRDVNHSDLVLFVHTFAMLAGPDHDPATVIAMLSSRTLQRV
SHLQSGAFRRLMEALALPTHSYIPTNAQLAVILKHAVRHLLSASQDFSWI
DRMSTLKFAGGLIEKRALWSLRFSKRAYQEREMPGGGGPFA
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Synonyms
Publications