Naga_100130g8, gene4956 (gene) Nannochloropsis gaditana

Overview
NameNaga_100130g8
Unique Namegene4956
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:211601..216239 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100130g8
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:211601..216239 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL013ngnoL013Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03330NO10G03330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5135rna5135-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5135rna5135Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5135

>rna5135-protein ID=rna5135-protein|Name=rna5135|organism=Nannochloropsis gaditana|type=polypeptide|length=1309bp
MEQSRLQAYLQSACSVLGFSVGEIWCCNDTKDAASPLNLRFIQLYTSPEY
DRYRSQLIEPPPDALEAPARRDDAKSPVPMDVSGHSFSPLVCAAVQEAKQ
VVWASTPAKDGLLSRPSLQLRSAVGVPVCSIGKEVVLLLMFSPAVLELTE
EAHRFLYTVAQAASDAVCGFLPASVASSLVTSAAWGPRSPLSDPTAPGEN
NMPHTRTLIEALPASVTFQMVEMASEMVGVNVPIKTEFLETFNSIYNPPP
PPLMPVAGGDGQGEEKGLDLDAFDSLPPLEDCFLPTELLEDGVLMSGLRD
EGMTGEDWDFGAALDFIFDKDQGGEELGVGTEGEWFGPGKGREGGEVLNG
GMTEGGQPDRLSQHTEASQPSGMDDNQSNLKQEVGGLQGKGSDREQGEDS
VIRFFYEDALQRLRFEEFVKGFLSMSVFHTAECWVARGKETLEQVYCATC
LADVQSWVRFSSKLHGDTQRALPARVLVENQAIWERDAQRLNPSGAGGGG
MENGGGAGKHVIQTAFGLPVHVDQSHRLVVIFYSTYSIEPAEIMESFVKR
ALDLLWNKDAQHAAALLAEQQQEQQQLLQLQHESSGGGSPSLGLSEASSS
YSLGSELGEDMHTNWRTSNLDNTGNHDGRIQSGQQQMSPHGVGGLRSGQG
SGQGQPQRQSSFSSMTKHSDMMGSSTSTYAFEGQQQQHHPQQQQQQQPVY
VFGYTPQDSSSTSSSYPSSSTTSHPYHHHQAALSTTTPSSPFSGPSATSA
FQRGSTTSSLPPGGGAAGPGFGTPPPLTYTSSTPILTTHGGIPVPAPRPA
GGQGSAGSQQQSSQQQQPQPSRPGSQPSCGGGQGTDLGTVGGQGLTTLIH
LPPGSSLPPLGGAINIGGTLYYPQHQVTGLQGAPYQQLPQHQQHPSSFGH
GAHTGPGGGGSLHREDSGGTSNLDFSMDLPAGGNIAASMMPPPATRSPSF
AQADHQAPQSIRFAQSGRQGEKGSVLSVRHDGGGSDKGTRGETVMHSGGR
NVSSISPHASGAQSETGCGGLPRTPSDYEMHMGGPSEMGGAGGVTGRKIC
KSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRC
TYPGCTKGARDKNFCAAHGGGKRCCIDGCSKSAVGGSFMCTAHGGGRRCQ
YQDCSRSAQSSTNFCVRHGGGRKCQVEGCQKVARGRTSFCAAHGGGIRCK
VNGCNKAAVGKFQMCRTHSGYLKKRASEQQEGDEEGGGVFAATASSPSSV
SVGGSSPSSLASFVDNPAKKRMIAVGKGGSNRATGIKGLYRGDAIAAYAA
AFNSTSPSL
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Synonyms
Publications