S29A1, gene4876 (gene) Nannochloropsis gaditana

Overview
NameS29A1
Unique Namegene4876
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:1057114..1060134 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100037g17
Gene biotypeprotein_coding
GeneS29A1
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:1057114..1060134 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G04000NO12G04000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5052rna5052-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5051rna5051-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5050rna5050-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5052rna5052Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5051rna5051Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5050rna5050Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5052

>rna5052-protein ID=rna5052-protein|Name=rna5052|organism=Nannochloropsis gaditana|type=polypeptide|length=506bp
MATNLLFQSLLVRYAKTAGKCSITFRIVLPLALLLSIFAATAVLVLVKDA
SRDGMFSFTALSVALCGFCTSVLQAAIFGYAAAFPPRYTQAMMAGQGLAG
LIVAAAGLATAASSRANGACAGVHLTEEGPGQGEQMAACSAYQEIDYHAL
AYFGTAVVILGVCIVSFLYLERLPLAQFFVGYNKRHVHSPRGAAGGGSKA
TLGLGGNRSGSGKGDDASVVESGLRALPMAVRSGAGGEGAADKEAVGVDG
EQGEEASDEESSVGLVGVLPNTDPCALLSRVDSSLSLLSAHGEDERGDGN
EESESWGNTTLHDIKSSVRTHQHVSFLVLLRRLGSPGLAVFLVFSITLAL
FPSTTVHIVSVRRCQGRGVFYDQAFVPFQFLLFNLGDWGGRTLAGHLPSP
FLVPAHRLSFYAAARVVFLPLFLLCNVDDSAFPIVFAADWWPMLFMLFFS
LSNGYLSSLAMMRGPAQLTVDQAERGGNVMVLLMTAGLSAGSVLSFLVSA
VSLNKF
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protein sequence of rna5051

>rna5051-protein ID=rna5051-protein|Name=rna5051|organism=Nannochloropsis gaditana|type=polypeptide|length=506bp
MATNLLFQSLLVRYAKTAGKCSITFRIVLPLALLLSIFAATAVLVLVKDA
SRDGMFSFTALSVALCGFCTSVLQAAIFGYAAAFPPRYTQAMMAGQGLAG
LIVAAAGLATAASSRANGACAGVHLTEEGPGQGEQMAACSAYQEIDYHAL
AYFGTAVVILGVCIVSFLYLERLPLAQFFVGYNKRHVHSPRGAAGGGSKA
TLGLGGNRSGSGKGDDASVVESGLRALPMAVRSGAGGEGAADKEAVGVDG
EQGEEASDEESSVGLVGVLPNTDPCALLSRVDSSLSLLSAHGEDERGDGN
EESESWGNTTLHDIKSSVRTHQHVSFLVLLRRLGSPGLAVFLVFSITLAL
FPSTTVHIVSVRRCQGRGVFYDQAFVPFQFLLFNLGDWGGRTLAGHLPSP
FLVPAHRLSFYAAARVVFLPLFLLCNVDDSAFPIVFAADWWPMLFMLFFS
LSNGYLSSLAMMRGPAQLTVDQAERGGNVMVLLMTAGLSAGSVLSFLVSA
VSLNKF
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protein sequence of rna5050

>rna5050-protein ID=rna5050-protein|Name=rna5050|organism=Nannochloropsis gaditana|type=polypeptide|length=534bp
MACRALALALTSPPVCLSSSRAVFSLTFMATNLLFQSLLVRYAKTAGKCS
ITFRIVLPLALLLSIFAATAVLVLVKDASRDGMFSFTALSVALCGFCTSV
LQAAIFGYAAAFPPRYTQAMMAGQGLAGLIVAAAGLATAASSRANGACAG
VHLTEEGPGQGEQMAACSAYQEIDYHALAYFGTAVVILGVCIVSFLYLER
LPLAQFFVGYNKRHVHSPRGAAGGGSKATLGLGGNRSGSGKGDDASVVES
GLRALPMAVRSGAGGEGAADKEAVGVDGEQGEEASDEESSVGLVGVLPNT
DPCALLSRVDSSLSLLSAHGEDERGDGNEESESWGNTTLHDIKSSVRTHQ
HVSFLVLLRRLGSPGLAVFLVFSITLALFPSTTVHIVSVRRCQGRGVFYD
QAFVPFQFLLFNLGDWGGRTLAGHLPSPFLVPAHRLSFYAAARVVFLPLF
LLCNVDDSAFPIVFAADWWPMLFMLFFSLSNGYLSSLAMMRGPAQLTVDQ
AERGGNVMVLLMTAGLSAGSVLSFLVSAVSLNKF
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Synonyms
Publications