MSH1B, gene4281 (gene) Nannochloropsis gaditana

Overview
NameMSH1B
Unique Namegene4281
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:586180..589130 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100025g56
Gene biotypeprotein_coding
GeneMSH1B
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:586180..589130 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02300NO06G02300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4437rna4437-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4437rna4437Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4437

>rna4437-protein ID=rna4437-protein|Name=rna4437|organism=Nannochloropsis gaditana|type=polypeptide|length=892bp
MVLSWLLINLFLTSELLRAARIRKNSNRYQKNKGSDDSDPQPADTAPIPV
GLEDIVRNLHERTWASMDLHVVQDRLAGLCDTVRAKELARSPCFAENVEE
VRRRYKAVEEIWQSADVIPLNDPMDIAPAVAFAARGNVLELPDLRSIAKA
LIILATLRDFVQAPVRKERLSQLSQYAEEIDLPFELVDLLSDAFDQDGRL
SGVKFPHLKRLRDEVDRLYGSIKNTVGQLMKSTGMSQMVTDEYIAQRNGR
FVLPIKNTYKRAGLGIVHDQSNTGQTVYVEPVQVIEPTNDMKRLELELLQ
EEARIVGEMTRLVAVSKDKILQSLDAGALIDISVARAKLGDLMGGAVVPE
VGTDGCISAEDARHPVLLLRNRNPIGNTLHIDPAKPGLVLTGPNAGGKTI
VLKTLGLLALLVRLGIPVPARRGVRVDFFSPILADIGDMQSVTGDLSTFS
GHLLVCREVLSNAASGALVLMDEMGSGTDPAQGVAIAQALLEALLETGAR
VAITTHYLQLKELAQKDDRFTVGAMEFLNGKPTYRFREGAIGESYALEVA
ERLELPASVLARAKGLMGGGALRVTELIKELEDQRDALQGEMEDARAREE
ELRAAQEAVEAQKVELGAREVELDKMKYRAKLETADAFLAQLQEKEKKLE
AMMKDVGLGDTKTSVEEALKELAAVKAKVAEESKPEVVHVPANLVLLKRD
DILKEGEVVVCAGDQLNSDRAGKVVKASGQNVDVMFSKGGLDIVITFKKT
DLARAPSETAARVNAGPYAGLAKNKDRKKKWTKADERNLKLLGQEVRHAS
TPAAITLNAMRTSFNTIDVRGLRLRDAEAKVDNFIKVGIPQKRKVVYILH
GHGTGQLKEGLREFMKRHPYVSRHRAADDSDGGDAFTQVFLK
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Synonyms
Publications