Naga_100078g16, gene4197 (gene) Nannochloropsis gaditana

Overview
NameNaga_100078g16
Unique Namegene4197
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:364162..365573 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100078g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:364162..365573 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0008135translation factor activity, RNA binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03380NO06G03380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4353rna4353-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4353rna4353Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4353

>rna4353-protein ID=rna4353-protein|Name=rna4353|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
MKGNLNDFVAKFPEKKSYFILTNEKVRFVFPEPGPLEGVKSLSKHILKMT
GVTFQYPTRDKPTVMDICLEVSRVSRVAVIGPNGAGKSTAIKLLIGELTP
SEGVITKHPNMRLAYVAQHAFFHLEKHLNETPAQYIMWRFAGNEDKESLD
LLNKKKEVDKEVTKYFIREGTTLCQCYSPAEEKLAVEPEAIINRHEDKKA
KTKEYEVKWRGKSTDCNLWVKRDVLLSMGAEKMVQKFDEKMAAEAGLQFK
PLTTSAIEKHLADFGIDPEDASHTLIKSLSGGQKIKVVMAACFWQNPHII
VLDEPTNYLDRDSLGALVQAIHDYKGGVIIISHNREFAGAVCQEKWIMDK
GRLRREGESVATREEEEVKEELGDKVVIDALGNEIKVNKQTTLSDKEKKK
EIKRIQKLITDGKKKKTISEDEILDLELKLEELKTAP
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Synonyms
Publications