Naga_100268g2, gene4185 (gene) Nannochloropsis gaditana

Overview
NameNaga_100268g2
Unique Namegene4185
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:331619..334008 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100268g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:331619..334008 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03510NO06G03510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4342rna4342-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4342rna4342Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4342

>rna4342-protein ID=rna4342-protein|Name=rna4342|organism=Nannochloropsis gaditana|type=polypeptide|length=541bp
METHPPIAASLFFISAATATTLALYSRKHKKVAFFRGPDMLHPPPASSEE
DGQAPSGAKVIKYKSVKDSKLSSELSIKDLECAHIHQANLLEIPNLGKTF
KGAHVQNLSQMSGTTSGESIAYNKLLGHQDGIIADIVRREGLPPETKVYV
RAGPRKELHFEPEKVRAAIVTCGGLCPGLNNVIRELVNSLFHLYRAQSGV
YGIRGGFSGFHDAHRLPIMLTPELVDQIHHEGGTILGSSRGGFDIDKIIH
FLEEKQICQLYIIGGDGTHRGANKIGEECLKRGLNIAVVGIPKTIDNDVD
LIDRSFGFQTSVEAAQAAIRCAKTEAICNLPNGIGVVKLMGRSAGFIAVH
ATLASGDVDLCLIPEVPIVLEGERGCLPHLAQRVQQKGHAVVVVAEGAGE
ELLGQSAEKDASGNKKLPAIGQFLKEKIGIYFKSQGQPSTVKYIDPSYMV
RSVPANAADSIYCSLLAQNAVHGAMAGFTQFTVGLCNNRLVYLPIPLVVA
TSPRVMDPVGRTWERVLSVTRQPNTAIQLGKDKITSAKTFL
back to top
Synonyms
Publications