Naga_100001g18, gene3940 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g18
Unique Namegene3940
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:835967..838109 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g18
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:835967..838109 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01110NO08G01110Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4094rna4094-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4094rna4094Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4094

>rna4094-protein ID=rna4094-protein|Name=rna4094|organism=Nannochloropsis gaditana|type=polypeptide|length=457bp
MHPRMIRIAMFLAAATLNYGDSFVYQSTRTLSMRIPYETPWRRHTKVPVA
RPGVHALSSLRVNQHLSGTVISLYEGTGHRKLFVDVGVTRTDVRGRHFPV
FGMVRLQGPYQNKTYTYGQQVQDLYVRAVFPEPARLFLSLTPVYKRPVSD
GTGEPLPVHRLQDLKVGMPLLNATVVSLTDNYCFLDAGVVRGQTEAEQAK
MMHDGGKGGEKGTPRRRLRHPKPRPLMGRLYRGDLLEQYALTDKFRTATT
KAVLTPGMSLPVYVKGVHLDSWQYSLTVDPEMTEEKAAALKEERKAQLKA
QASKQPVDALLIGESRKGVITKILPGGVKVGIGVKITGFVPLDSVSEAYG
EEIKDLSRVLVVGGRLQVEVDEVSDDGKRIDLRCLEIFPQVGSTKKTVGK
AGKADQASGRRKESVGEGAKKGEQKRMSNPSYDDDDDDDDYGGDEDDYDR
LGYDDEW
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Synonyms
Publications