Naga_100001g82, gene3881 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g82
Unique Namegene3881
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:675035..677923 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g82
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:675035..677923 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL139ngnoL139Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01810NO08G01810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4035rna4035-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4035rna4035Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4035

>rna4035-protein ID=rna4035-protein|Name=rna4035|organism=Nannochloropsis gaditana|type=polypeptide|length=962bp
MSLSTPIPPDFEGEPPPLYTDGMFEEGVEGVEEQHVNVSYMKGEGEEIEG
VHTADMERKGGQLQGRAAAQSEEAAVFMGGACPENNMGMRISTSLNSIET
DVTNAGRQEVLSPRNRTTPRRSCGGPKVWMEEKVFGEDPHGGKRPCSTCR
KSKVRCDRGFPCTRCVRLGLDCREQARVRRGGLSRSHGGRPHSANSSVTS
GGSVHRESSACSMDSLNQAGKEVIMPPSVSSSSPSSQGQRRRADAFGKRG
GGRGRGRSRGIVRPLHVNNMASHPVAGHTVHPGLSEPQAGQGTRAPFPSS
HLPTLSDPALLCADAALDAGASFYGLGSGQEGDDCSMSQGASGNHPTRRS
FLLNPDGPSLPLQHPHQASQYHSKRPRQQQNQEEQTHVPYHALKQPAQLH
FSPGRRPAPHHQLPAHASATYLVSPTQTVMESFLKLHAQSRICRGKSLAV
MRSWALAYSKGLGAAALGDRLSVLSAALGIDWKTALTDPATVEEAARATT
GSTAPEAVVAFEPAHLDPFLRALYTDASAAAALVACQGHTQLLGNALFSR
DFIDPASCNAAWVQVRERQQEAGTDPMDILGGLLSREDQGEFFHSVGAML
FSNPRPCAEMAHIARVLTRQRESILALVRVRFHLADGGGYSAFVLSFQRL
PCSSRYMLPSAAVTPSVSTHSAGQGPARTASNGSTSISSCTTGSNSGSAG
GGGGMRRGASTSSNSSSTSDGLNLQGNAEGQGEDDDTSASARSTTSSDFS
SFSSHHRDQQQHPRHPQPPLRQQDEVEGQKRPRHLSPPFLVHGANASAAA
MAGRVSGSYPGSGEAGEGKAALSPSNTVYGGAQQVKGGEVSVLHSNNGQR
HAQNPEGIEKEQLSQPSWLRGVEDTWWVSAGPHDLERAPAGLPTLEAGEG
MPHGMGTDAKIPPTATDAAGGDGQHGGGGEGPLESALTDALAGENARATE
RDEMLHFLEEYF
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Synonyms
Publications