AK/HSDH, gene3872 (gene) Nannochloropsis gaditana

Overview
NameAK/HSDH
Unique Namegene3872
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:653318..656026 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g91
Gene biotypeprotein_coding
GeneAK/HSDH
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:653318..656026 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL139ngnoL139Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01700NO08G01700Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4026rna4026-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4026rna4026Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4026

>rna4026-protein ID=rna4026-protein|Name=rna4026|organism=Nannochloropsis gaditana|type=polypeptide|length=902bp
MPDRRIGDTTRWCVYKFGGTSVASAECYQTVRDIILTAQESTPRMAVVVS
AMGGKPKVTDLLIETVMLAAKGDVEGYEQMLHLVREKHLACATQLFSPAG
AQFYETELDEDIRNLRDILRAVSFMRYSGEKIIELVSGHGEIWSARMLTR
LFRDGGHDFMFVDARKVLFVDESGESGPDVMWERSKGALDDYMAQSPGAC
PVITGFVASTVEGVVTTLKRDGSDYSASIFGRLLNATGITIWTDVDGVLS
ADPRRVPEAKVLADVSYSEAMELAYFGAKVIHPKTMTPAVAASIPIFIRN
TFNPSFSGTRIYVSSASTMDRDKCVCGFSTVDNMALLNLEGSGMIGVPGI
ANRLFGAIQQTGISVSLIAQASSEYSISFATRQCDADAAAKAVTDEFFRE
FKSHLMNKVDIIRPCSIIAAVGDGMSNTKGAAGKFFKALGNAGVNVLAIS
QGSSERIISAVVKGSDSTKSLRAVHSAFLLSNQVISVGLVGRGKVAKAMV
EVLRAQADMLYGRFGTEFHLRAVMDSTGMLLSSTGPTLGLEGLDAAFNAY
KLPADLKAFTKHVRAEHLPHAIIIDCSDAEEVAREHPGWLEQNIHVVTAN
KKGLCGSMSLYNAILRQRKVKQHNYMYEVTVGGGLRIITSLQAMLIGGDS
ILRLEGALSASMNYVMGLISPVPPCRVPSLDSNGRSSSISSSMSNSSGSG
GLRRSYSSLLNGHTHETAKTPLSLSEAVSEASRLEVFERDPLNDLNGVEM
AQKLLVLAREMGLPLRLEDVKIETLVPKDTPLDEIHRYNEEVAARVTAAR
IRGSVLRYVGCINEAGEAEIGIQEVPFEHPFATVRGAGYCFRIFSAFHSP
DPITIQGTIGLPKATAAGLFSDLLFVAQRLGATDKGHTVQGVRVLSDSLI
EA
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Synonyms
Publications