ALARS, gene3846 (gene) Nannochloropsis gaditana

Overview
NameALARS
Unique Namegene3846
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:593125..597056 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g121
Gene biotypeprotein_coding
GeneALARS
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:593125..597056 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02150NO08G02150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3998rna3998-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3998rna3998Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3998

>rna3998-protein ID=rna3998-protein|Name=rna3998|organism=Nannochloropsis gaditana|type=polypeptide|length=991bp
MSIGGTAEDVNGLHEGVADLSIETAWSARRVRQTFIDYFTNKREHVFWPS
SPVVPHDDPTLLFANAGMNQYKPLFLGIVDPKLPLSKLTRAVNSQKCIRA
GGKHNDLEDVGKDTYHHTFFEMLGNWSFGSYFKEEAIAWAWDCLVNEFGL
DPSRLYATYFGGNEKQGLTADEEARNIWLRYLPPNRVLPFDCKDNFWEMG
ETGPCGPCTEIHYDRLPAREVPELVNMDSPDLIEIWNVVFIQYNREEGGA
LRELPSKHVDTGMGFERLTSILQDKPSNYDTDIFMPLFDAIQELTGAPPY
AGKLGKADPESRDMAYRVVADHIRTLTFAIADGAVPSNDGRGYVLRRILR
RAVRYGAKVLGAAPGFFSKLVHVVVNQMKDIFPELEEKEKRVVEVLADEE
RAFNRTLDQGEKHFKKVADELLLAASQRGGDKGEKVAFPAKEAHYLYSTM
GFPVDLTELMAEEKGLTVDRAGFETLLAEDKRQSAMAAAAKKEMGGKEIV
LEAEQTAWLQSRGVEITDSSLKYVWHHEPSARVMALYKGKAVGFVEEVTA
EDGVVAVILNTTSFYAEQGGQIHDTGVITNLDGTDTLRVDSVQSYGGYVL
HIGPLESGALRVGDTATCMVDYERRARIAPNHTMTHVLNYALRRVLLKGV
SDGSGLCDQKGSAVDDEKLRFDFAWNKALTKEELAEVETIVRERISQELP
VHSYIAPLEKALHINSLRQVFGERYPDPVRVLSVGHEVPPMLEDPTNPAW
QDTSVEFCGGTHLSNTREAERFALIEETGIAKGIRRITAVTKDMARAAEE
LAEEFAGLLALAEVKPEEELEGEVKMLNTRLGPLTISAVEKERFRTALDA
LLTRVKKFKKEKVARSRDIALSRVTEIATEAAASGRSVVIERLDFGTDGK
IAKEALDKASQIHPSGCFLLISADEDSGKFGVYSTAPKLGSPLDPIAWVA
AAVEGAGGGRSGGKSPRGQGVGEGLEKIGSAVTAAKAFAGV
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Synonyms
Publications