Naga_100001g141, gene3827 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g141
Unique Namegene3827
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:543634..546807 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g141
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:543634..546807 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02350NO08G02350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3978rna3978-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3979rna3979-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3978rna3978Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3979rna3979Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3978

>rna3978-protein ID=rna3978-protein|Name=rna3978|organism=Nannochloropsis gaditana|type=polypeptide|length=857bp
MFGILLNEFISFLFVGNTLPKIETDSASMVPRKKRRKCCSIRTAPLALCM
IIYSLLLLSLQLCVKAYSTLPLCGSGDKIRFVRRLRKEGRKRDIGILCSP
SCSTLRVMQVTMSSPAPFFSERRRAITTGSESCHSVELLTPSAGRIRRFR
AERGRQLENELARIEAAGARAGLDLYIKALRSCAKLGKVDVAMMLLRQMQ
EQPAGPRRVPATPLLAFNLVLEAAAKAQDRDVALSVYNEMLCGVGEKAAT
GPASPGVGVNVFTYGQLLSLFAKLADGRAALDILEEMAAQGVKGNAFTYT
SAIDACERAGLLYETERLLREMKDRGVMPTAVTYNTIIARRAERVDTWTE
ALDWLAKLEASGIQPLRSSYAAAINACERAEEWELVVELTERAEELADTT
MWSRSLSAMLRLGRHESVLATFRQLREEKTIPVDEVMYTLALKACALGHR
PFHEARALLMDMRTSGLTPNVVTFSAAMEACGGDTDSNGAPNWEMALEVL
REMKAQGVEPSTVTYSTLMDILTDSGQWQRALHIFMTLEREEDQAEVPKT
VWLYTAAIRACAKGQQIDTAIALLREVTTDPSAHGAPDLCLFTAALDACE
KVGDGPLALQLLDEMSRDHNIIVDDVACGVVISACRKAGLVGDCLRLLAF
MLNHRLAPNLGVYNTVLGALCSQPEYLDKAIEVLHFLKASQPSSSSNLNL
RSKPSRTPRPNAQSFSQVIDALADALRWEDALSLLQEMRNVGHRPEVLTC
AKVVAACEKKQRWKEALHLLDEMRKDDYSFYELELLDQVFKKLVGVAAAG
LRSISGGAADSTSETARAATDSGREGQGESMDNDDSSLHPELLNREKKDD
RVPKARR
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protein sequence of rna3979

>rna3979-protein ID=rna3979-protein|Name=rna3979|organism=Nannochloropsis gaditana|type=polypeptide|length=847bp
MRPVTGNTLPKIETDSASMVPRKKRRKCCSIRTAPLALCMIIYSLLLLSL
QLCVKAYSTLPLCGSGDKIRFVRRLRKEGRKRDIGILCSPSCSTLRVMQV
TMSSPAPFFSERRRAITTGSESCHSVELLTPSAGRIRRFRAERGRQLENE
LARIEAAGARAGLDLYIKALRSCAKLGKVDVAMMLLRQMQEQPAGPRRVP
ATPLLAFNLVLEAAAKAQDRDVALSVYNEMLCGVGEKAATGPASPGVGVN
VFTYGQLLSLFAKLADGRAALDILEEMAAQGVKGNAFTYTSAIDACERAG
LLYETERLLREMKDRGVMPTAVTYNTIIARRAERVDTWTEALDWLAKLEA
SGIQPLRSSYAAAINACERAEEWELVVELTERAEELADTTMWSRSLSAML
RLGRHESVLATFRQLREEKTIPVDEVMYTLALKACALGHRPFHEARALLM
DMRTSGLTPNVVTFSAAMEACGGDTDSNGAPNWEMALEVLREMKAQGVEP
STVTYSTLMDILTDSGQWQRALHIFMTLEREEDQAEVPKTVWLYTAAIRA
CAKGQQIDTAIALLREVTTDPSAHGAPDLCLFTAALDACEKVGDGPLALQ
LLDEMSRDHNIIVDDVACGVVISACRKAGLVGDCLRLLAFMLNHRLAPNL
GVYNTVLGALCSQPEYLDKAIEVLHFLKASQPSSSSNLNLRSKPSRTPRP
NAQSFSQVIDALADALRWEDALSLLQEMRNVGHRPEVLTCAKVVAACEKK
QRWKEALHLLDEMRKDDYSFYELELLDQVFKKLVGVAAAGLRSISGGAAD
STSETARAATDSGREGQGESMDNDDSSLHPELLNREKKDDRVPKARR
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Synonyms
Publications