Naga_100001g215, gene3764 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g215
Unique Namegene3764
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:399124..403450 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g215
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:399124..403450 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03050NO08G03050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3912rna3912-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3912rna3912Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3912

>rna3912-protein ID=rna3912-protein|Name=rna3912|organism=Nannochloropsis gaditana|type=polypeptide|length=1219bp
MVVGFTGPWYSTEEELYTSRVICATGAIAGLAIIPVAITARHRVFQKRVD
LANESVARLFENFLLLKAILDGCLCLILLGGLFVRGDSIGCSFLGFFFQL
EEVMTLALIMRMVMHPFHFMLRKRDMTDTKEYFNRSILVCVLVSTFVCIP
LAASREFGRSGSLCWLTSVSTQFYAFFTLVFFTWIVSMIVIVRLARVTQH
RHAVRLLTVYHGNFFRRLSDGMVTRLVFIGVAVILYGYVFRVLARAYIWR
NGAESPFLSGMEMLTIAFRGPVDAIFYSPKDWVVRLARFYRHFCLGQKRG
AKRRTSMDLASAAEPVRLTLIGKAYPLPFFTDPPVPSFQDKQLFISTYNL
GECKSKALGPEALAAWIPRDRDVYVLGLQECMVYRRLGEDVLAHLGGPEK
YVMYRRAIGSTYQSLGYHGLIALLVLARTEEVQANRFLLHESKNSAVARG
KNLGVTTAQNKGGVGLAFRYYDTTFALLACHLSSDLKGRSRLDKRNQDAW
QLTYETNLWREEYLLDVHHQHHVCIFLGDVNYRLRRTDPEKVLEDVASIC
RRERDVLCGGQEEWRRDRYALLLAPGNGGPGPGEGTPLEGGRKEKDDGVR
DSEPCGGVDEPGVLESGGDEGEQQEPELLEEDPVDEEAEEVCCEQERQGV
SSLVRQVKEYLEPSNTEMAKLTMKRLASSYLSEEGPMEVAARGLDESGDP
GRREARRRTWSARLWSSIREHLWIRPQSSLESAVRHKAEGPDLEEGRRDP
GPASGTRRLPGASEMGGLQHPLPPPDQRTNLSFSRLRARSHASSWEQLLR
DDEMRQGMEKGAIFYGFQEGKIRFPPSYRRIKGPHGECGDYCDVETLKTA
YSTVVKEKTLSLKKLNRGLRILAPYYRFLQRDSQGQALEEQSSSRTPSYA
SSGWESSSTRAFSRSYNGSGMENGEDGRDGEDVSASSRAPAGAKKVQRHA
TTRIPSYTDRILLHVVEDFKDRIRLGPYEMCDALQGSDHRPVSTLVTARV
NVAVRGLNSFHQAKSCLQNPSIVHNRDVITVHDACFYILELTDLRVELLA
ANQMGIHRAGGSSKHEGDRPAGNGSAPRDEASVFVLFPLDNEDCFSTLRR
PAIVAAVSKQIVFLTNKVEYNPFNFFSLMSYRAAKKNGVTVVSCTRMDYG
GLHAIFSLRDGRKGQLGTCVIPITSKDGRVQMEQKNAVFPMTVGGCLCGH
LFTSVRITQLALDMSTVRT
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Synonyms
Publications