Naga_100018g27, gene3730 (gene) Nannochloropsis gaditana

Overview
NameNaga_100018g27
Unique Namegene3730
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:303377..307442 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100018g27
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:303377..307442 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03370NO08G03370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3878rna3878-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3878rna3878Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3878

>rna3878-protein ID=rna3878-protein|Name=rna3878|organism=Nannochloropsis gaditana|type=polypeptide|length=1292bp
MSPSRGNDEGPDKEDKCVMRTACAALPTLLSVDEAHFESPEGLSCSVPKK
GGRPPPYTTSSPASQCQRRRRALAATLLFLCLVAGIAAVFRSRRQDGNSK
TSGPVVAEDKIIAPAVVSKGGPSEAVEGIKIEKSGSHESASSTAKGSIPS
EGLLPGGGGDARVQPAEEKGGGEEEDASWGDYIAVHGCTPDTGVQLRSLV
ETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFS
VEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLM
LVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLL
REVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVIT
GSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGL
WTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTH
NMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLT
NCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDT
CVTAGGALLVRVGYTGTPAIVATNPNLFNFYVAGNFFSLNSSTDVVLATR
NVFIIWDAPGVGKRGMSAAGGGRRRELDDQGAAEEQDRWREEGARVEPGG
PSQEQYAVTALGRTSSVIMRHVSWQENGLEDFKAAFRKGILGSEPGGEGS
VEAAGTRNGVLNVGSLLRWPHYLRQLQHHRRVQVEQAAGGPLSSVDPPRA
PETLAPNTGSFPPVEQGDVGPSTLSAAMLFNASFYTPLAPGSPILVPRPD
PATTTTNKVYLASTLGRCQACDVRGPRMRAGGQEGEVEGDLEAPALTSAH
FNGAGAAGCEFRDVCGTVQEEVERDAQEMQEQMWMSDPERGIQPNTTLGI
MDFVVSYAPSLPPHPHGPSRGGTAVTAEHVQTAVNQTMQSLGLSQRLLLR
VVATGNAPPYSSSNHGVGESGEAGSRSLEQAETREGGIGGGEPECTATAP
FRAYLVTDHWKVANQASKRFREASTVLLLTDTIQAQVPSVCGVTTSNTFS
FYVPSVNASALLAKEKDKNNFIARITGSTENAVTQYIRDDDLQSSDGFLS
TEPFDFGEEGPQQPTAALLAITSQNAKEEVEDNDVEQVRVFRVVMGKSYR
LILRGFPPGRLLSLRLVPKEGRSTLLGMTMSSLPTASSLPFLSASTSSQE
WTWSVSRTKHEAGDYFIEVTSQTQDAFAYTQAFALLEFSTRK
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Synonyms
Publications