Naga_100010g76, gene3388 (gene) Nannochloropsis gaditana

Overview
NameNaga_100010g76
Unique Namegene3388
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:595041..598086 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g76
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:595041..598086 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0016740transferase activity
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL134ngnoL134Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02290NO07G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3518rna3518-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3518rna3518Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3518

>rna3518-protein ID=rna3518-protein|Name=rna3518|organism=Nannochloropsis gaditana|type=polypeptide|length=1009bp
MLRIGCVTGRKWVREACGLALPRTRRPSVPPGRLKPPFSVSEASDEASVR
SFSSSVKRTRKKSPGQVRLKNEPLCRVAAVVDYGNPMQNLVLGTGVLATQ
CDGAAVGRQGGCLVLGTAVSDRQAPAGAGDDFLPLVVEYREKAHAFGRIN
RSVNRREGAQSDQEILASRVIDRVIRPLFPEGFIYDTQVVTTVESSDRQN
DLTVLSVNTASAALAVSNIPWNGPVGCVRVGMTPSGKLLINPTEDEMQES
DLNLLYAGNEQRTLMIEAGGSQVPELEMIRALKFAHFHCGAIIKAQQQLA
VQVGSPKRVVPPILPSSAMWDLAHAVGYQKAVDLFSDTKLTKSDRSRAEA
VLHGEIRTAVKEAFPDCHDLAPAICSDKILRHGLRDAAVNNHSRCDGRKF
MELRRISSAADVMPSVHGSSIFTRGDTQVLCAVTLGSEDDAIKARYTDDD
EVPGKKAFLHYDFPPYSVNETGKVFGSNRRMVGHGALAERAILPVLPSSD
DFPYTIRITSEVTASNGSSSMASACAASLALMDAGVPVKAPVAGVSVGLL
SQPEDESETLTETGNSDDEELCTTSSQTREECNLEKEESVHAEDQDGRQK
VPGGKRGKAQLLVDILGTEDHFGDMDFKVAGTLDGITAIQLDIKLAGGVP
PDILVDAIHVAARARRQILGFMGKTITEPRARLKDSAPGMEVVKYSFDQH
KDIFTLENRRLVEDEYNVRLSFPERGKVTVFGRDPKKVLEAHRHVQELVA
DIQEGEVYMATVVEVKDFGAVLEVLRGKEGLLHMSEISHHKGSRSTAEML
AVGQQVKVQCATVDRTRGLIKLSRKALLDPGEPDDLHPDLSAAGVLPKVP
VPPGTYFTHMDMRKARMRREAAVSEDKENSGLKKDVKKNGDVTRKRSPRK
PIKDDDKRSSLLVLDGESLPRKTSLSASSENQGKTRQKRAVRSRSSRKKD
VNVINAPEDSGSPVKAEGNGTLENMSKSMPSIPESLSSEVEGVPRKTISS
TDLKSEDLA
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Synonyms
Publications