Naga_100192g4, gene3238 (gene) Nannochloropsis gaditana

Overview
NameNaga_100192g4
Unique Namegene3238
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:220625..225617 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100192g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:220625..225617 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL132ngnoL132Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00610NO07G00610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3363rna3363-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3363rna3363Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3363

>rna3363-protein ID=rna3363-protein|Name=rna3363|organism=Nannochloropsis gaditana|type=polypeptide|length=949bp
MSTSPLSPTGNGVRGRSEGAGEDAGALRRWSKGGEECEGDQARGEDGKVG
RRVDDDMLNYGDRRVDDDMLNYGDAKEKEDGHAETEEDEDGSQASGDFGV
GREEEGGEEEPRPEVDLKPRAEEVPTAGVERRRSRRETRGRHSLREGEEE
GGLRGLGQGSNASVISGGSQGGRRGPKGGKQARSGGSNSNSGGKAAHAQP
QDLQYYDMDDFMEGEGGSGPGKKCAKKSRRELPNGAVATLKGWLLSPEHI
AHPYPTAQDQVALMAATGIDKKQLKNWFTNARRRIWKPMLRRQTDESGGP
GRVSRGGGAGLDGGGVGNGAGLPPSPSSSTARGGLAPGSLQLPPHYHPSG
ALARSPSPLSPSGMGLGSPPLHNHSALDSFTSRSAAASPEPFSPRLYRSG
QQQLHTSSPISPSAAEAAAAAAVAFSSRQHQQHHLLSEHPMGGGHMPVAG
MGGGKGSGTGVFYPRHTSSGLPPPPQQPPSATTGGGGGGMTTMGSLGTLS
GFASVEDFFKNFLGDGSNSPLNAAGKEGGQPALMKTFSSRSFGNFRTSSS
LSDFPRTDSYAFLEVFFNDDGLDGLGGGGGREGGKGGGREENIGLSMDDD
MVLGGTTGTATMQGPGLGGGVKRGISSVSVGEEEPAAGANSSRMKRQARE
QGQGGYESFSPTPMLEAQVGSEGGTEGGERPPHVPLPALHLPGSRPSSGS
HSPRSRSGSPLHAGGGAGPVYHAFFKVGSHGNVVPSGAVMGTSGVSFPHP
PEGGAPGMEQVSSSLGGRGEGESIGGGPGPSGEGVGREGGVGKGGLSRSP
TLQEVMMEQYYQHHQPPPSGPDSHASARPASPPSSEPVHVSTGARCPFCP
TLSVDTQLRPCGHLFHGNCLKPWLQKSPSPPACPVCRESIASCVLAIPCI
ATGASFDSLPPVAGEGEGGGAGRTVEGPEHGKERLEAESSAVQMAGSHV
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Synonyms
Publications