Naga_100192g5, gene3237 (gene) Nannochloropsis gaditana

Overview
NameNaga_100192g5
Unique Namegene3237
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:217857..220311 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100192g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:217857..220311 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL132ngnoL132Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00620NO07G00620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3361rna3361-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3362rna3362-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3361rna3361Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3362rna3362Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3361

>rna3361-protein ID=rna3361-protein|Name=rna3361|organism=Nannochloropsis gaditana|type=polypeptide|length=331bp
MASPAPEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVK
STILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKT
EWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPH
QSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGIT
LPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELF
EVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQVRRGGVKV
FGKLVWNPCDDVRVGDSSCSLSVSSVPVRFG
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protein sequence of rna3362

>rna3362-protein ID=rna3362-protein|Name=rna3362|organism=Nannochloropsis gaditana|type=polypeptide|length=342bp
MASPAPEKKYTMAVKAYKNPDFLNSGHARFIRVMCEYEETMYRLKAYGVK
STILFFGSARAKSREQYDHRMGELVEALAGAVTEQEQKDAEAAIATLRKT
EWLTEYFDKVTELSKRLTDWSLQSEHKLAQARTYTGVTRYHLKTRGPVPH
QSYSIIDEDVKEHPEQSIYITTGGGPGFMEAANKGASEVPGALTIGMGIT
LPFEDGLNPYVSEELAFEFHYFFTRKFWMVYHCQALVVAPGGMGTLDELF
EVLTLKQTGKVQPDMPVVLFGKEFWKSIISWDALADYGVISQKDVSGLFF
ADTVDEAFDYLLSRLTKAPLNDIFKEFDGDKQAMDNTESVVA
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Synonyms
Publications