Naga_100192g6, gene3236 (gene) Nannochloropsis gaditana

Overview
NameNaga_100192g6
Unique Namegene3236
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:213847..216742 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100192g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:213847..216742 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL132ngnoL132Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00640NO07G00640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3360rna3360-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3360rna3360Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3360

>rna3360-protein ID=rna3360-protein|Name=rna3360|organism=Nannochloropsis gaditana|type=polypeptide|length=764bp
MTLLPPHSHTFIHTQIHYQQRWYPATLWWSVGYRGVPSSLSSTLKCISCD
ICWRATQPKRQKPYHRLEAWQELGVASMRFSLLTLLLLLHQSRGFFWLPA
APGLLLERFRGRSPFRVPLRVAASSRGLPEDDPTSPLPILPPGLENFRRL
LSSLPTDDESKAQSLYLISLGDQYAAATARSIASRGGRRVPGCVSVVHMT
VRFSSDGSAVHVDGISDARLSYGLVALVAQGLTGESPETILSLEPTTLPK
ALGLTGGMMQQAPGRHNGLANIVQTVQDEVLARLHESRVPDFQGERGARE
AILAAPAERPMLTTAGTKEFAVPVAVDPSHAAPTPAISFPTPAQLPLLTH
SFPSEEVAVLLSGGVDSSVALHLLQQQGYKPHAFYLKIWLEDELAHLNQC
PWEEDWSFASAVCRQAGNVPLEALPLQKEYWAQVVAHTIQEAKEGRTPNP
DILCNSLVKFGVFYDVMGRRYPKVATGHYARAVPAAGGKEGEGLVRLMRS
PDRIKDQTYFLSRLTQEQLARATFPIGGYEKHQIRAMAERLDLPTKTRKD
SQGICFLGKLRFDDFLRHYLGESPGEVVWLEEDVVVGKHQGLWFHTIGQR
KGIVPTLTNAYRPLGPWYVAAKDVGRNVLFVTNSPESLSEVGTGEGPGEE
ARRTFRVDGMTWVRGAPPPELLVPGASLMLEVQVRHGPNSHRGSRVRILD
DGRGEGPSSLEITLPREDSLAPGQYAALYQDVGEEGSECLGAGVISEETW
RIPQAPARLTVNRR
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Synonyms
Publications