Naga_100069g18, gene2956 (gene) Nannochloropsis gaditana

Overview
NameNaga_100069g18
Unique Namegene2956
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:659497..661267 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100069g18
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:659497..661267 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL128ngnoL128Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01750NO09G01750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3078rna3078-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3078rna3078Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3078

>rna3078-protein ID=rna3078-protein|Name=rna3078|organism=Nannochloropsis gaditana|type=polypeptide|length=332bp
MGTFRGESALAAGCSKTQEGRSTTKTSRPTHPHKISKIMLLLLILAAMTL
TATHARSATEVGGSGATPSSPTTSGRKRALLSSKKNEPQDDEAKPTPTRK
SKMSRMAGSPSARRKRAPRGKQDFATLSSSRSSTASLEEDPDVIPFLAST
RFKRGEALTSQGGGGLLFTLARRAGKALVGSSAFRFVAEEKIFETVAGML
AYRIAFQWSKDSTATRKARLLFTLYVCLYLGALLYSRQQAIAQQDARTLK
VAAVPAVLSSLLDMAKKMKKGESPGGLPGLAGLARPQEKEMTFRDYDLGQ
IKAALDRFSLFLVGMTFLHFKMKNTYMIMYWG
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Synonyms
Publications