Naga_100059g30, gene2929 (gene) Nannochloropsis gaditana

Overview
NameNaga_100059g30
Unique Namegene2929
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:570980..573172 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100059g30
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:570980..573172 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01560NO09G01560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3051rna3051-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3051rna3051Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3051

>rna3051-protein ID=rna3051-protein|Name=rna3051|organism=Nannochloropsis gaditana|type=polypeptide|length=730bp
MSESEEEEESEEDGRVTKKKVSAKKKTKGAVPKKTTTKAAPKTKRKPALK
SKKPTVKKEAKGELPKTALSSKAVRIEQAMKAFKWWDQEPLPQGIQWRAL
EHNGIFFPPDYVPHGVKMLYDGKEVELPSDLEEVATFFASMPPDGPQLGH
PDTRKIFVKNFFGQFKEMLKDKLEDDLGIKDFDKCDFSPIRAHLETQKMI
KKAATVEEKALVKAGKEERQDHYGYAIVDGRIEKVGNFNMEPPGLFRGRG
MHPLMGMIKERCLPENIIVNLGPDARVPPCPLPGHAWDRVQHDNKVTWLA
SWKENVLNGVKYVMLAASSSFKGKSDMEKYDKAARLKQCIGRIRRDYEGN
LGKKADREAKQIATAMWIIDKLALRVGGEKGEDEADTVGCCSLRLEHLRF
PPPLEDGGESSGAKQYEIELEFLGKDSMLFKQTIDFASYGENGKQVFKNL
RHFVKDKKPEQDVFEMLTPSVLNAHLGSLMPGLSAKVFRTYNASETLQNE
LPTVEDLAGMSVGDKVVAYNDANRKVAILCNHQRTVTKTMETALGNLQER
LQLLKDQKKELLGQKELLKSGKTNKIRTRKDDVLTDKAVKAMDKAEDLRK
KAATPEEKIKASHALDEAKELKRQAQAAKAKDAHLFARPPTKEQVDRKIE
QWREKITKLELDIRNKDENKEVALGTSKINYMDPRISVAWCKRVEVPIER
IFAKTLRDKFVWAMGVPPSWRFEGTSKPEM
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Synonyms
Publications