Naga_100104g18, gene2875 (gene) Nannochloropsis gaditana

Overview
NameNaga_100104g18
Unique Namegene2875
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:440754..445900 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100104g18
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:440754..445900 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01030NO09G01030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2996rna2996-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2996rna2996Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2996

>rna2996-protein ID=rna2996-protein|Name=rna2996|organism=Nannochloropsis gaditana|type=polypeptide|length=842bp
MLYTLDASFSGRSCQINKTGLVSKAGRPTLAQISSSGGRGRRRDHFLTLK
GTVPLCRTLTPLTNKEGVCLNQHTADGMTTFLNPGPAREKLVGSGVFFEG
SIGVVGHESGGGVGSQDEMDTDHFNELDHIFDLSYSAEQDPFGSGSGHAQ
SQGTGYGHPPQTQLGGASLLMPHPHNSHGAISHDGSRMHNDGMDWRAKDE
DCSYHTAVDASCHIDSSYHHVDASGHSMVDASGHSTIDASGHDSLIDSSG
HYDDYLAHKGDARYMEHSCEACKRSKKRCNRRNPCQICTSRGIKCVPQIR
GPGRPPGSKSSRGCTSLSLSSSRHGSSRGDIRAANGSGQSHNSSATTSAA
SSTSSSLSRSLSGNGLLQQGQELAVGARRHSPPRDPWHCRFFFEAARHCK
EAFLRTWHDNELDTAKCIMLRNLWTKVSSQLASGTDMTFGICDQLQEVVG
PAPTGSGPMAGSPATRSKSHAAQQAQLLTHPGSKEAMGPHCLPLDLRRME
DGVSMLCGFMFLQDELFVYTDERFAATFMTREEVESKVGSLAVLPILLLA
EIFHPDDLPDIYAAIGAYWFSRRSSTTSESGSSSSSSTNSSVSSAGSRES
AASATGTPEASWICKCIDKANTEVTAFVRFRSFVAPAEGYPGAAMLSILP
LKPSKYLADPDTKGSVRSGVSSRLQMRDTFGALPTALPEQDDEDLGDDLV
GRRPSVDRMEGLGPGAGEGQDPESDDALFRPLRRGMTVLSDETSGPQAVP
VAKQVSDPGVQHQDHACYSQPTIHISQLSSALRSTVGLSWGGRGPTAVGN
LFHRRSSPPMPRRKVDNHLLVSRKMAKAVVVTLPRMMVVGGT
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Synonyms
Publications