Naga_100008g47, gene2561 (gene) Nannochloropsis gaditana

Overview
NameNaga_100008g47
Unique Namegene2561
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:944702..948196 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100008g47
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:944702..948196 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL120ngnoL120Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G04000NO05G04000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2678rna2678-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2678rna2678Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2678

>rna2678-protein ID=rna2678-protein|Name=rna2678|organism=Nannochloropsis gaditana|type=polypeptide|length=988bp
MEPLTRGSSLAEASCVCLGSGRFLRAVLVPAVEAAGLKSIVFQTRGNSFL
SMMYGPRRSKGSYEVDTVEFDGRTLTTSHPIIAAGTLGTAEGQKAWAALP
AQLPHLRVIGVGVTEAGLAPGTAAMKDLCQFLYACFKADIQGPLSIINTD
NVPGNGPKIRSFVTEPTQLSKVTALPETSKEMEDFLSFLDNKVVFHSTMV
DRITSQRVGDGDVPRAEPLPTKALVIEDLGNVLPAALEEAPGVVIRRTAG
EIEIDHSLKLRVANAIHTAMVYCMALSRMPDTSACIGHPLIMPYIQALYE
QDIVRMTSMGIPLAEVQSVYDDWVRRLQHPQFGLGCLFVSQNASQKLGLR
LLPTIRASIDAVGLPGPAFAFAVAAMLRFLTPCGPQPRLAPNVFMGSMDP
KPQAQPTEDNPKRAKRSNGTEIVYVGDLTADFEAGTYSFRDGEGTVPRLL
QAAQAAAGAVGLADEGKAGRIAVLHSAVSKVLSLQAGLDSVAATPFVSLV
AAYYVKMVDGAPCMEVLRPIVEEAISMKNIPVSAREDMGTELMRPLRPGE
IARVVRDEMERVQVVDLHTHLFPPSHGDLMLWGIDDLLTYHYLIAEYFQT
APRAMAPASFFARPKAFQADMIWAALFVQRSPLSEACKGVLTTLEKLGLR
QELRARDLSGIRRWFAEQDPDAYCEKVFSLAGVKYCVMTNIPFDPTEAKH
WRPAKKAYTRRFRSALRVDPLLKGDWETVSACLTAANYPQTLEGARQYLR
DWAETMQPEYLMASTPHDFQYAGKEGDGGSCQSSKDGKKGGQEGIGQGCG
VTMIDKSPKGAELLEKVLIPVAEELSLPIAMKLGAHRAVNPSLGTAGDGL
VAADVGDLRRLCTAHPQVKFLATFLARVSQHEAAVLANKFPNLHLYGCWW
YCNNPSIIREITAMRLEILGTAFTAQHSDARVLDQLIYKWSHSRRVIGEV
LAGEYVSLAQTGWKLTREEVRRDVERLLGGAYEEFMQK
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Synonyms
Publications