Naga_100120g4, gene2486 (gene) Nannochloropsis gaditana

Overview
NameNaga_100120g4
Unique Namegene2486
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:759689..761784 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100120g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:759689..761784 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL117ngnoL117Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03230NO05G03230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2600rna2600-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2600rna2600Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2600

>rna2600-protein ID=rna2600-protein|Name=rna2600|organism=Nannochloropsis gaditana|type=polypeptide|length=587bp
MEHDLPGCPVLPPSASNCCRVRNSGEGRGRHVIATRPLPNPGMTFLRDKP
FAAVVADLYRNTCCAACLHVCTEQIFVCGACKVTFYCSSACVARDSMIHA
GPECHALVELDAFGVEGDSQAMRLALRLACLAAKEEARHDNGKGGSCTAP
PLNAFHTSTFISSLEDHFDDIKDASIKNSIQTVADALSSFLESGIKAARP
KNEIPAPPPRPRFDMARLLLAIQCNAHSIRDSYESNLGLGVYPIASMLNH
SCQPNAYHVFRFHQGEGPPTLLFKTLRAVGTGQELVYSYTDLMRPGQLRR
ATLANAYFFSCDCPRCTVTLPKAHKYIECEKDNGQETTDSEDNCVDSSLE
WSLQSIACDTDSCAGAFCCSGSDEEYYCLVCGARESSAALKKKLTVATAL
LENGIRRLETDSEQHIAGRDKDTYTASESALPEVLRGLANLLFATNRPAG
LHVQHWMIYHALLCLSNYLMAPDAGVHPLEREDEERAWLRAACEIWALRS
LWRLCGGLEHSKGSKRILFFPELGSRLTRMEKALKAYAKACGGNKKFEEH
LKYGAWRLPLVTEDAEVTGGGNKTTLESVREILGKDL
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Synonyms
Publications