Naga_100026g60, gene245 (gene) Nannochloropsis gaditana

Overview
NameNaga_100026g60
Unique Namegene245
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:646983..649444 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100026g60
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:646983..649444 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02430NO02G02430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna256rna256-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna256rna256Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna256

>rna256-protein ID=rna256-protein|Name=rna256|organism=Nannochloropsis gaditana|type=polypeptide|length=751bp
MVNENPLILKRHLEDEEGAMLLQKERATSSVRPEAMATFIFGGQEALSRR
LRALAFIEKDPVFDTKDRKHLDQKSRYVRSSEKAVHLVLKCRRLGIPFTQ
MLDILNVALDEITPTDVHTKMAIPSLMHQTTPEQRAKWLPLAENFRIICA
YAQTELGHGSNVRALETIATYEPSSQSFILHSPRLESAKWWPGGLGKSAT
HAIVLARLLLGGKDKGLHSFIVQLRDLRDHTPLPGVTLGDIGPKLGFMSV
DNGFCLFDHVRIPREHMLMGLAEISPDGHYRKRKGANGGEKILYGAMLDV
RAGLVERGGATLARALTVAIRYSAVRRQGYAPSPPGKLSQSAPLELQVLD
YPTQQHALMPLLAWSFALQITGQFMRRRYKAYLRELDLSLLPEVHALSSG
LKALTGEVVSQGVDVCRRMCGGHGYLLASGLPEVFSNYTAVQTFEGTAQV
LEPQLARFILRLSMAPTERPKASGRGAATAAKAPFALSSDFDYVPLAAGK
TFVRCRAATPVAFLDPAFQIEAYEARVSALLLLAREEVEADLRGGEGGLA
ASMMKNGVLFGRLSRAHCQLVLLRRFHEAVAREEGRMTMTTARNGGVDGE
GNGGRIDLGAADGSEEGESEDREETVTVGPAEVRVLRNLCHLFALSGMER
DMAEFRARDYLSSGQAEMVSREVLRLNRTVRAEAVSLVDAWLLSDKLLGS
ALGRADGRVYGALFEEALRSPLNDKEVSEAYTLHWRRLLMAGDCAWENAR
L
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Synonyms
Publications