Naga_100210g10, gene239 (gene) Nannochloropsis gaditana

Overview
NameNaga_100210g10
Unique Namegene239
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:631996..633678 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100210g10
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:631996..633678 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02370NO02G02370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna250rna250-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna250rna250Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna250

>rna250-protein ID=rna250-protein|Name=rna250|organism=Nannochloropsis gaditana|type=polypeptide|length=427bp
MQRAKVKKKPTQQTVPLSSCPSETKAISNTKFWHFAIIAALMISLIVTTV
TIVPLNWRQFGTRHNAIFETNDFTLAHLQNCAQSDAVLEQPPEQRPQEVL
AYTTPWNRQGFAVAETYAHKLTFLSPVWYQLRAPQLQRNDYDGRGLELTG
GHEFNNTWLRNVRNKSKNRVRIVPRVIWEVPAFVLPTQVPIITQLLAEEA
RDRGFDGYTLEFPVDEHGIFAELTRSLKNALSEAIPLLSSPTLIVAIPAF
QMPTRPQTPPEYHVTPRLLLTLAPHVSRFSLMTYDYAQTPSGAPISPLPW
VMRTVEMLSNREGEQGKADARILRGKMLLGLPWYGYAGGQAITGHEFQKN
VLDRAEHVRRVWWDEDTQEHVFVYSASHGEEAGEEVRATYPTPAFFKRRF
ALSRELGLAGVAVWEAGQGLVCFPMLW
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Synonyms
Publications