Naga_100004g140, gene2388 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g140
Unique Namegene2388
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:522117..524294 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g140
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:522117..524294 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02180NO05G02180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2498rna2498-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2498rna2498Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2498

>rna2498-protein ID=rna2498-protein|Name=rna2498|organism=Nannochloropsis gaditana|type=polypeptide|length=515bp
MFSCENKIASIVLLLACFITCVAYMPVPLFRRSFFSSSYGFPSPALHGMG
LRVKERGAHALQFIMRQGSSTVLDNDASAKEIVEEARARLRPAFDDVDSR
TQRILKRVLKSFRKQQVGTHMFNGIDGYGHGDVGRDSLEEIYAQLFGAEA
ALVRVQIFSGTHAISCALFGVLRPGDKMLGLSGQPYDTLEEVIGTRETHK
DEDDNSIPNQRFLTGSLEEWGVAYDQVDLLPSVAPGQYFNLSEIDRQIDA
DVNIRVLHIQRSCGYQWRPSIPVAEIGNVIAHIRAVFPDRELIVFVDNCY
GEFVEDLEPTHVGADIIAGSLIKNPGGTLAPTGGYIIGKKHYVDAAFKRL
SAPGVEGGATLGQNRWLLQGLFMAPSVVGESLKGAMLLAEVMGSGFGLPC
NPAPGTYRTDIIQAVQVGSRDRVLQFCHQVQRLSPIGAYIRPTAGVSPGY
GDEVVFAVGTFVDGSTLELSADGPLREPFTVFSQGCIHWTHWALVLEEAL
VQMGFCKNSAIDVDF
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Synonyms
Publications