Naga_100004g92, gene2349 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g92
Unique Namegene2349
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:421484..423456 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g92
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:421484..423456 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01680NO05G01680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2456rna2456-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2456rna2456Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2456

>rna2456-protein ID=rna2456-protein|Name=rna2456|organism=Nannochloropsis gaditana|type=polypeptide|length=557bp
MGPRVAASQGSYSRVLSGTVGLHKFGMTTTEVKAVHAEAKVQEGAEEEEE
EDDDQGGAAEGQGDATTSNGGTANKKKKKKKKKAKSAGTGSAPSETSAAG
EECDVEHASGDNDNDAEEDGDGAITAEDAIKKKKKKKKKGVKGASGVSGA
VPGQLHPATGVPGKKAPGRGVSGFTDSYIRYGQTEPPTIPVASLFAEGHF
PKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYA
QSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYT
PNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREA
TDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSI
GPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHY
MKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQ
KGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEV
LSRGDDF
back to top
Synonyms
Publications