Naga_100109g5, gene2253 (gene) Nannochloropsis gaditana

Overview
NameNaga_100109g5
Unique Namegene2253
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:182893..185577 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100109g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:182893..185577 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL119ngnoL119Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00600NO05G00600Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2358rna2358-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2359rna2359-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2358rna2358Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2359rna2359Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2358

>rna2358-protein ID=rna2358-protein|Name=rna2358|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp
MTSSSSSLMEETTKKVPLSSEIKRTRPALQYQSGFGNHFSTEAIPNALPE
GQNTPQTCPYGLYAEQLSGTAFTVPREHNQRSWLYRIRPSVVQSRFIPVA
SSLSRLGLLNKPEVTTPAMLRWRPLPLPMPASDPNAPTTAGSGVDFVDGL
VCMMGAGDPGSKQGLNVFMYAADTSMVDVAFQNSDGDFLVVPQMGTLHIR
TEMGILEVEPREIVVLPRGIKFQIDVDAPSRGYVLEVFEGHFQLPQLGPL
GANGLANPRDFKYPVAAFQDLERPFRLFNKFGGELFEATLPASPFNVVAW
HGNYAPFKYNLDDFCCVGSVTYDHLVGRQEDLGGMGLIGFVFLLGIVITP
FGLFPRHPSI
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protein sequence of rna2359

>rna2359-protein ID=rna2359-protein|Name=rna2359|organism=Nannochloropsis gaditana|type=polypeptide|length=474bp
MTSSSSSLMEETTKKVPLSSEIKRTRPALQYQSGFGNHFSTEAIPNALPE
GQNTPQTCPYGLYAEQLSGTAFTVPREHNQRSWLYRIRPSVVQSRFIPVA
SSLSRLGLLNKPEVTTPAMLRWRPLPLPMPASDPNAPTTAGSGVDFVDGL
VCMMGAGDPGSKQGLNVFMYAADTSMVDVAFQNSDGDFLVVPQMGTLHIR
TEMGILEVEPREIVVLPRGIKFQIDVDAPSRGYVLEVFEGHFQLPQLGPL
GANGLANPRDFKYPVAAFQDLERPFRLFNKFGGELFEATLPASPFNVVAW
HGNYAPFKYNLDDFCCVGSVTYDHLDPSIFTVLTCPSAVPGVAVADFVVF
PPRWMVMEHTFRPPYYHRNVMSEYMGMIYGKYDAKEGFLPGGASLHSCMS
PHGPDLATFEKATTEALAPVKFEGGLAFMFETCYVLKLTEWAVNAPHLEE
DYEERCWARLPKKFVAPQEDGSQK
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Synonyms
Publications