Naga_100109g16, gene2244 (gene) Nannochloropsis gaditana

Overview
NameNaga_100109g16
Unique Namegene2244
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:166125..167768 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100109g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:166125..167768 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL119ngnoL119Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00540NO05G00540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2348rna2348-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2348rna2348Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2348

>rna2348-protein ID=rna2348-protein|Name=rna2348|organism=Nannochloropsis gaditana|type=polypeptide|length=547bp
MSSSSQQSSEKVALLKEVTGIEDDDVATFLLSKNNWDIQHAVQEYLSGEP
TLASSPPALVSASSPAGQSHVRRRSTSPGTERRVRAHQQQWLQARRDGKD
AEVEESMGGSAGGGGEGDEAPLLGLRGGGEGNGEERVGAGSMEMEQGGRN
GARGGGASLPFYLVGNVLHTLLAPVRYIAGVGEGMEGETQNPKEAAEAFI
KNYEKEYHCAGVEGGGGGEVEGREGAGEIGEGGGYAWTPRPRPRFLPLSF
QDATRLASREGKLLLVYVHAPLHEHTPAFVQRVLNTDPIVSFLDGNMLVW
GGSVHSADACQTAQILDAAAFPFIALVACQRHPHLSVLEHMEGVTADIGP
EAILQRLTAAMARLQAAMEQQQAVVREREERSRLQAEQNREYQEALEADR
RREAALVAEKARAVQEAEAAQRRAEEEREEEEKKRVVYAQCIAEKQSRLP
PEPAPGSPGALRLRLQFPHGKKLDRRFRPTDSIQIVRDFIDVQVAEEEKG
GKEEGCRLVNYSLSTPFPKRTFGEVGMTLQEVGLHSADTIYITDLDA
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Synonyms
Publications