Naga_100009g40, gene2025 (gene) Nannochloropsis gaditana

Overview
NameNaga_100009g40
Unique Namegene2025
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:929665..931130 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100009g40
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:929665..931130 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01560NO04G01560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2120rna2120-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2120rna2120Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2120

>rna2120-protein ID=rna2120-protein|Name=rna2120|organism=Nannochloropsis gaditana|type=polypeptide|length=387bp
MEMELERDWLSEGYCKGGTGRIGAQEEEVWDQNCATDCGHYGPQTSKYTS
FQPHRAIPMISFVRGKTRYADPKDVDGDFNHDNDRHPAPGPASDDVCPST
LYAELIARPGEEPDVSILNDNDISILPTRKRRRRPCERPQRTPLGSSATA
ASSLTGDQNDRIEENERPYYKMVHGERKAVEPCVTLISASASSPVIFIVD
EDDSEKETSGHATISAFDCLVCGERVTSTDRATHERSTLHTFNAKKRVSC
GRIMLPESNRGVQLLARLGWKEDTGLGKHAQGSVQPVKSILKLDRTCLGH
QPLPPARVTHFPSHDAGQAARARDGKSRAQRKVEEVERRVHEGRAAAREG
FVLSKKGERCETARGRRRRLEKEKESWSRISAALNQE
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Synonyms
Publications