Naga_100009g109, gene1966 (gene) Nannochloropsis gaditana

Overview
NameNaga_100009g109
Unique Namegene1966
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:786899..787985 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100009g109
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:786899..787985 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL109ngnoL109Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G02160NO04G02160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2055rna2055-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2055rna2055Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2055

>rna2055-protein ID=rna2055-protein|Name=rna2055|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MLRPRAGVSMAAVATTATLFFLGRARASPLVAQAAFHAPRGSPSSYSPAG
ATLVSRGIRTRSGPGSAIANSIRHAWGTLLRSTMVEEVDPGEVEGTDLRV
LKYPDPRLRAANAEITEFGPEVAALAKDMFKVMYAMNGVGLAAPQVGVNQ
RLMVFNPQGDRLKWLNEVILCNPAIVEKSGKTDIMEEGCLSFPGMAGDVE
RSLTIKVTFQNAKGKKFTKKFRDWEARIFQHEYDHLDGVLYMDRLVPESK
QKVQPVLDKLVSDFGPGGAL
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Synonyms
Publications