Naga_100177g12, gene1942 (gene) Nannochloropsis gaditana

Overview
NameNaga_100177g12
Unique Namegene1942
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:731468..734061 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100177g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:731468..734061 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL111ngnoL111Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G02640NO04G02640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2031rna2031-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2031rna2031Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2031

>rna2031-protein ID=rna2031-protein|Name=rna2031|organism=Nannochloropsis gaditana|type=polypeptide|length=818bp
MARFLNLNLLVFVLLFLSGAAAQEGKTGESTEKNQKDAPVEAKLIETSAP
TSSETTAPKPEHTSQPSTTENAKDALKEESEDIILPQEEYDTPDNALGKT
TFDGSLEEAVFTTDADTGAGEQKEIDGDTIVQEGMEPPSNALGQTAFGGS
LEEAVFTTDVPEKDMMKDVATSLDNPLGGPLDEELEAAAASEVDDEMETE
ADVPEKEVEEKEVQKIEADGTDDDTIVKVTEVEAVTDVTEDAAAPAVPEE
DILGDAMKAIADSADDASVTLYIASFECDLEHVIVSESDNTVTCSVAAEA
SHGVSTITAAFYNVPMTKRILMHFGEEDLISGSVRSGVWQLELTIPKAAD
QGVWSLGFDDQGAFYGLEVTDKKGNTVNYAKQAAMDSIIPLQTSLTVESY
AGNTVAYPQANVQTSSGVLIYGAACVDATATVTEEAKTIICEALVIPDEA
GIGSSTIYMVGPTKKTVLPIVFDEDSEALLVPATNVTRTMFLLTSTLTVP
TWAEPGTYSVPVSGAYQPRTLSGAATVRLINPLTLSAKPALTVVSVSDRS
APILSNFYCNNGRQVQLSDYDPLPVNCLLRATDDLSGVSYASLHFVSPSK
TDAVEFAFVPSSPGLGPFPPASVKQVAENVASNFPPDTEPGAWTLARAVT
TDNAGNYKEYTATELDNANVQTFFLVQSSTKTFSIAPKPGTAINPDPAPG
QATTGRGGEVGEEDENIDGRLKAVLWWNEPEKQSLECVQVTIAGVDGATR
RRKRKTRDRQRIGTSTGRDVVTLRGIRQRGGRTWWERVSRHGIEAAKGIL
QWRSPARFLCHITYLLFD
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Synonyms
Publications