Naga_100002g118, gene1818 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g118
Unique Namegene1818
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:433268..441132 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g118
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:433268..441132 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03840NO04G03840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1903rna1903-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1903rna1903Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1903

>rna1903-protein ID=rna1903-protein|Name=rna1903|organism=Nannochloropsis gaditana|type=polypeptide|length=2405bp
MATQPDHCTTGPGCVYPLERKSGHHYGFSIFSLGQGLEIFKWGGPHIWTA
GTGKIKMPPQTWNIGPRPQLIHATEKRLRPIVGGLVFSRSGAGTAGKWLL
LVALCYCLHWCSAADAPVTLLPPNHVVEGQLASNSYRYYEVVGSGRSGQD
LVLTATPLGGDVDLYVSLGSDLALPTRERYEWASSHLGADSLVIVDEDPK
NCQHQPPAHPGQAPAACVYRVGVFGYLGGGFSLLARWNNSEPVPLALGRP
QSDAVTAGTFRQYSFDLSPKALAGDGGGQGADASTGATPAVDLEVLLHPL
LGDPDMYVTLDGERPGGEHYQYQSSDWGAAVDRIVLGPHDPRFQRWCPEG
RCQVRIGVFGFREASFSLLLSAFTEPIRLQLDQPISLTLRPTLAQRLTVP
WPGAADVGSLRVSVSPQSGPAPRLYASCRSSRPNATVHDWELEGTATLSG
QSLVIDTALGTNKGCDAGSNLTLAVAADSLASLSLLVSTDAAGSIPRLLP
GLQTPGRAHNGAMAYFAVRVGGADYTDVELVLTVTSGEADMYVSDSYEGR
PRIDATTGVVSSYSLSSAQEGDDRLTVKHSLFKDCGARAGRDGKGGGGGS
GCFAIVGVLGRQFASSEFRLLAKTLDSTLTLHDGVAVRDTVAAKAYAWYK
ILVVNPQLDLTLALTPLSGDPDLYVGVPPVMRPTKGNHTWASRSFGADSL
TVQAAELRGHCEPDPSLGVGCPVYVGVYAWSRASFSIMASLNTGWLNPSV
LIPGLPQSGEVAKSAYHYYQFRIPAGVDGAVEPLVRITLLPEDDTDQDLY
VTFSAEKEPGKENFDARSTSWSDNDEVLLAPGGPHYCTGCSVYVAVYGYD
AGPYSLVATLSTTQQQLQLGVPVRGAVAAASSSFYVVDWQGGSEGGGQGG
EALGLAVTLTPEAGRPQVYASCSLAYPNATTHMWALDSREDQVLHVNVSS
GTGPGGAPCRHPGKLWLAVAAPRGGGGAASYSLLVAADNASTSMPLLVPG
TPTAGMVRFHRFQYYQVRTGAGNVDMDVVLSVIRGQADVFVSQTFEGRPV
YDAAHNKVRNWTAKSTSRGSDRLLVPRTLFPPCEKDCYFVLGVFGKSVVP
PARYSLVARRAEGIVALQDGVALRDEVGEGEYLYFSFKLTDPEADVSIHL
TPFNGDPDLFVAPAPNARPSATNHTWASRSLGPDTLTLQCSDMKTHCAPD
PSRGLACDYFISVYGYENASFSLLVSLHQGWREPIELFPGLPQAGEVNEG
EYVYYSFYVPPDTVSLQFVLTPQDLWGEDKDEADDWDVWSDDWDDVADQD
LFLTTSRDREPGEDTFDLRSTSWAGVEEITYSAAELQEEGVFCTGCTVYL
AVYGYAGQGGEYTLRVETGLVTLQNAVPVTGHLVKGGAAHYKIYSRDSNA
HLLFSAVTLSGDADLYILAVEPPAADDDNEDTQEVLPSKEHYHWKGDQVG
DDVVEIVPSDAHFCSECDFLVTVAAFTNTSYVLTASVEAMSIVPLAGGRP
QVGHVDRDNMQYFSAVLGSSTEGLRVSLTLFSGHAEIFVADRVDPSRLPL
PEDPTSWRYSSRSNSRGRNEVVIPGPHRNRTRFAIGVRGLEDASTFSILA
SFSQSLIFLQEGVPVQQSLAPGRMAWFVHRLARKEDVRVAVTALSGDPDI
LASTLHPRPACVRPPGSSEGETGTASYVCGNYTWMAQTYQSDELVILHDL
PCEEVGNTRVNTSACAPYMLSPGHSLYVGVFAYDNTADTTFTLTLTTGSG
HTKLLPGRPQHGNTRLGAICKRRRADGSCDTSTAEPPADSSKAYVAYYRF
LVSPPSALFGEDEAAHVSVVLEPVCNATTFTWEGLETCRVGCPCDPLELY
VWSCAESQCTSEDEYPHPDHYQTRHIAAQAYNTVFLAHDKYNPNNGFCNP
QTAGEPCLYFITVYHPEGGGVSRAVEGGGFTITASTNHDVTILPTRRHPP
PPDGLVSSNLEAVDITVGGRMGSKRYQMYAQQGGDVQLVLEPCTGSMSLA
VCDGSCVGLYPTEHDYRYLADSTQTCTREGCRPLPGAQAMPRIDIKGVAE
DSLFVAVNGTGVYSLRVAMTTEGHAIAPVLAPATGSPAPSLKHVHRDSVT
VTWPAATLTVPGKKSGRGGGRGMQAHGVRYKVFAFPEAVLQAFRQSASPA
EAPVLHTVCGVERYAARGQTAETTGEGPLPTSYVGDVAEGMTTHTVTGLA
PGTEYLFMVVGSCDQACLRANSKSAGGEILPCGGAVPCQDQRSLYPPTRA
TTASGAWVGGVGSGARELWRWVLLVIGILAIVGFLVRRKILHRGGGSGGV
LGRNGLREGRSRVGRPQQVDYEMTVSPTGSCAAGQPRNEFASPRDGRGAG
RGRYEGRCFQPIDPLGLDPGGGNRRVQRPNAAQRPSAGGLRQYHPAWHLC
AATNE
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Synonyms
Publications