Naga_100002g119, gene1817 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g119
Unique Namegene1817
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:429799..433003 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g119
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:429799..433003 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL110ngnoL110Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03870NO04G03870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1902rna1902-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1902rna1902Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1902

>rna1902-protein ID=rna1902-protein|Name=rna1902|organism=Nannochloropsis gaditana|type=polypeptide|length=921bp
MIVRRCGRQRHMPIRALLHPNGATRVATFLSIVCVFASLSVQYALRLHPS
TPMTCRKSSSISVVSLSDRRKCGDICKHYAVSSLTAGSGSEDDSPTMRRR
PPPPWPRPSPSATSAYTVAEVKALGERIRKGIDLNNAFKDLRNWRMADEG
RTPVPDAMYRAILEHCRHPRPPRAYASKMLGLAGNVVQSYFLDVVASSSA
PSALPVKEFREVLQAMSRARDAEGAVALLRLLTLQCQENGGKAGPASSYL
DEYLFFLVVKCCCADAEEGSKRARSTPALAAVAPLMAEMDRLRIPKSSFL
YSAALKGFGRMQWRERVEALAEEMMDRREEVALDTVALNSLLDALTRVGD
LDRARGILRDMAQASYVSTSYLRRGVAEYRPVRRGESGSPSRSTAPPPSR
VGGSTGLPLPDQYSYNTVLRALGEEDLGAAIALYREMRDAGVQPDRVTVN
TLVAACAAHGRLDRGLLILESSAVPASVEGYTALISALAGKGELEKARDV
LESMRAAGVAPNARTYTALLQGAARAGDMAGVWAAVGRMQEEGKRDPRLR
PTVWTYNAVMAALARAGRVEGMLALREEMAGKRGKAGVAPDIVTCNTLLA
ALLLATDPPRLRQAEDLFMEMLEGGPFPDCYTFSMLLRAYSPSLPSRPPP
PRSPVDLLQRLPNALLQPKGDQGEDGLERAAAAVDAAVADAGDDPASCPP
RGILPGPDRLLELMASRHDLGVLLDTTAVNSLLLALVKAGALKRALEVFQ
AFKRGSLSALVPIPPERFASPEEGRPGIPDVITYTILVKGVAGSDNVYAG
SKIMQLYREMRGEFQILPDLQLAYALVNSFALARSRVGGLGVEDLDEVLG
DLRELGWKGEVLSRLEKRVSSYRGLYSEAWKEGRGGWEDSRGGRDRRPKA
SDRLFDKYGWNKFDSGYNFFA
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Synonyms
Publications