Naga_100142g6, gene1683 (gene) Nannochloropsis gaditana

Overview
NameNaga_100142g6
Unique Namegene1683
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:28485..31565 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100142g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:28485..31565 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL107ngnoL107Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G05080NO04G05080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1750rna1750-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1750rna1750Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1750

>rna1750-protein ID=rna1750-protein|Name=rna1750|organism=Nannochloropsis gaditana|type=polypeptide|length=400bp
MPSTRASALSTSASSESTVPSVIEEENGSKPLVSAQAKVTTQRRASKRRA
LETKKSQDDGEQDLLDVVPLPAVPSLFPVLDAHGNDDEEEDEESTDEEEE
EEEEESDDDITLVMTGPPRYRAFANKYIRPGLEGATGVADAEGGGAGGHD
KAPGEAKEGDEDKEEEAAEARRRALAWEGFGADEEEGKEGGVGDEEEADM
FTNPLKHPAIRTYTQDFKDEDFPPTDQLRLRFKRTAFDIDITTVEEKGWN
RTGASAADYFNYGFVEESWALYSEKQIRLRWLAQKKEAQTAQEEEKLLAS
LLEAQAAEGRKYEEEEEAEWGGKEEPLPDGQVEAAGDYPPPPPFPPPPRG
TPPGMMEQEMGEGMPPYPDEPPGYPPAWQRDGPNSPPPPCSLPSMAAAAP
back to top
Synonyms
Publications