Naga_100007g24, gene1491 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g24
Unique Namegene1491
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:905216..913730 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g24
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:905216..913730 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02000NO01G02000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1547rna1547-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1548rna1548-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1547rna1547Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1548rna1548Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1547

>rna1547-protein ID=rna1547-protein|Name=rna1547|organism=Nannochloropsis gaditana|type=polypeptide|length=1858bp
MMSCCPQNVQCRTFNDDRCGGNTEKRAGATVAVVATPVGSLTASEGRGHG
APRARPPAFKKKERCEQAKARHRFSASTLRRVCLTGLRLWPLLLGGASSV
FASPTSSPLRPSTGPASPPAVGNAKVTISAAARVLTAPGASTSSSSSSSN
PGVSVAAAATAAATSSTAKAPPRIPLPPASSKLRDSGRLMDDHSLVKLLF
LIVGLFWVLVVLAFLYWAPVVSFFNLLVLTVIVAFIKSEGSSWHHAQEFE
NRFWTAISFITSVVLVFSPDSPFGVGRWSHALGWTLCFSVAYAVHSYDRH
LHRVTISRKPEFVRIRRGAAGTQAAKASTSWASSSSGSSGKGGSLPCSPP
GSPPASGNRPRASSGAFAGASGSGVRAKVSTSTPGSQATLTTSGIATAEE
GTPSTREDRAASFSTSSTGTHRISNDWATALLSGREQPHAQGDQPLEKAQ
ESGPGNASGASCASATSDPDDKEGGGVRQDFASSENMQSGEEQRWQSLIV
SGSDSINLSNKSGSSSNNNGSEPTSGGSASRPGTHATGAGASTSGPRLLN
VLLQAQAGEGERVADAVVKAQMEEKLEVIEHALKAVDQYLISRTVSNWFN
MQKVLRLERTIINIFNVARTDELNFLVSHVTLALLFYKIKDHVLSSTKRY
LNRTHLIELLAVTRISELEIPERAMVLDALQQMRLTAHPRSEFWVRNILL
CTLGDSLSELKSLMDAKGDFQSLHKLVFDDIRTEKIRNEILVHIRKQAHV
QAAHMILGTRLARQRKLRQPWRKVLSDVDDTLASSGGRFPAGIDRRLPRH
ALYPGVLAFYRELDLGTTGPDEWGPDRDQGNLVFLSARPHLYKDVSEKHS
YAKFRKLQEKRGMHTTPTLLAGSLDTGYSYVMDRNIEGLAQKKMENFEQF
VSLYPEYSFVFIGDNGQGDLRAAELMAKKAESLGGSHPPIDAMYIHRIQP
LNQSYGYDEHAFNRWRSMGICFFENYIEAAMDAAARRDPPLIRVTGLQRV
VKAAVDDFYRIEGWPSPREEELRRVELNRSILRANDILTKHGLPAVPPIL
SQHKSRYEEGARVMTLYGGGTVKRYRPNDGVYEVVLDWTCSVSQQQQREQ
QQASSSPGKVSDKLLLEKQRPLTPLSISPPRVEHRSRSLSSSPVEGARRL
RTSAAGSVGIPLSPPPISSPVATTRGSTPVGGTSVSSPCTSESRASDQTF
DGGPTTEPNQDPSRESPLASDPSTPRVYRSATASTPLTAPTTQGEGGVTR
GRRTPISPVGAVAEGRGMHFKAPSNAACMTPVVAYLQDSAIMYAIPAVAV
AATPSATTSSAGPASTTLSSTSNRTGFSSYISFFPGASYLSRLRPERGPR
FPPGTFVGTPYGAGVVLNHRPAGALPPPSPSVALNASRVPTGKPLAASSA
PPSPEITEPVADGQQDSSSTGDKSRPLTPPSMALSHANTASTAPMVAESA
SQPLAPPAPCPPSVPQRARPEMYVVELRWGAKAYLPASAISSGADGNMTS
SRGLSSSGSNSRTTSPRGGRGGGKQAASTGPEPPSGILAGMMSLLSLGSG
QGRGGGSRSEETASSSRPAPLSPGMAVSTRFGEGAVRECRERDQVLVISL
PASMTAYVPAARLEEFLISASKKGDEKSSAHRKRRPRSLSALENSKTVVG
TSYPVFSSSSGEGASGPEGHGRRSLSPVSGSNRGNGVASSSLLGFWKGSA
ATEKTAVEPAVNTSSEAMTRDGKGKDTPLTPSSEPRAPAYLSLPVAGDQE
QQETEQDRRPPSPTCASGPYLARSEKAGSQSTNIKSSSSVSTGLRGWWGR
GSADTIGKKTLAVGDRVSAGEWGEAVVLRVQEADSRVEVAFTRWRGRGFL
RTSAVKPC
back to top

protein sequence of rna1548

>rna1548-protein ID=rna1548-protein|Name=rna1548|organism=Nannochloropsis gaditana|type=polypeptide|length=1957bp
MGMSQDRPWNLMRAWTTLKVSWPFKREKRTLVPLLRHARTAASSSGGRRP
TTPERLQASLSTTDSGKDSHDAAAAPDSLPPPSIKALDPAEPSCSSPHVM
MSCCPQNVQCRTFNDDRCGGNTEKRAGATVAVVATPVGSLTASEGRGHGA
PRARPPAFKKKERCEQAKARHRFSASTLRRVCLTGLRLWPLLLGGASSVF
ASPTSSPLRPSTGPASPPAVGNAKVTISAAARVLTAPGASTSSSSSSSNP
GVSVAAAATAAATSSTAKAPPRIPLPPASSKLRDSGRLMDDHSLVKLLFL
IVGLFWVLVVLAFLYWAPVVSFFNLLVLTVIVAFIKSEGSSWHHAQEFEN
RFWTAISFITSVVLVFSPDSPFGVGRWSHALGWTLCFSVAYAVHSYDRHL
HRVTISRKPEFVRIRRGAAGTQAAKASTSWASSSSGSSGKGGSLPCSPPG
SPPASGNRPRASSGAFAGASGSGVRAKVSTSTPGSQATLTTSGIATAEEG
TPSTREDRAASFSTSSTGTHRISNDWATALLSGREQPHAQGDQPLEKAQE
SGPGNASGASCASATSDPDDKEGGGVRQDFASSENMQSGEEQRWQSLIVS
GSDSINLSNKSGSSSNNNGSEPTSGGSASRPGTHATGAGASTSGPRLLNV
LLQAQAGEGERVADAVVKAQMEEKLEVIEHALKAVDQYLISRTVSNWFNM
QKVLRLERTIINIFNVARTDELNFLVSHVTLALLFYKIKDHVLSSTKRYL
NRTHLIELLAVTRISELEIPERAMVLDALQQMRLTAHPRSEFWVRNILLC
TLGDSLSELKSLMDAKGDFQSLHKLVFDDIRTEKIRNEILVHIRKQAHVQ
AAHMILGTRLARQRKLRQPWRKVLSDVDDTLASSGGRFPAGIDRRLPRHA
LYPGVLAFYRELDLGTTGPDEWGPDRDQGNLVFLSARPHLYKDVSEKHSY
AKFRKLQEKRGMHTTPTLLAGSLDTGYSYVMDRNIEGLAQKKMENFEQFV
SLYPEYSFVFIGDNGQGDLRAAELMAKKAESLGGSHPPIDAMYIHRIQPL
NQSYGYDEHAFNRWRSMGICFFENYIEAAMDAAARRDPPLIRVTGLQRVV
KAAVDDFYRIEGWPSPREEELRRVELNRSILRANDILTKHGLPAVPPILS
QHKSRYEEGARVMTLYGGGTVKRYRPNDGVYEVVLDWTCSVSQQQQREQQ
QASSSPGKVSDKLLLEKQRPLTPLSISPPRVEHRSRSLSSSPVEGARRLR
TSAAGSVGIPLSPPPISSPVATTRGSTPVGGTSVSSPCTSESRASDQTFD
GGPTTEPNQDPSRESPLASDPSTPRVYRSATASTPLTAPTTQGEGGVTRG
RRTPISPVGAVAEGRGMHFKAPSNAACMTPVVAYLQDSAIMYAIPAVAVA
ATPSATTSSAGPASTTLSSTSNRTGFSSYISFFPGASYLSRLRPERGPRF
PPGTFVGTPYGAGVVLNHRPAGALPPPSPSVALNASRVPTGKPLAASSAP
PSPEITEPVADGQQDSSSTGDKSRPLTPPSMALSHANTASTAPMVAESAS
QPLAPPAPCPPSVPQRARPEMYVVELRWGAKAYLPASAISSGADGNMTSS
RGLSSSGSNSRTTSPRGGRGGGKQAASTGPEPPSGILAGMMSLLSLGSGQ
GRGGGSRSEETASSSRPAPLSPGMAVSTRFGEGAVRECRERDQVLVISLP
ASMTAYVPAARLEEFLISASKKGDEKSSAHRKRRPRSLSALENSKTVVGT
SYPVFSSSSGEGASGPEGHGRRSLSPVSGSNRGNGVASSSLLGFWKGSAA
TEKTAVEPAVNTSSEAMTRDGKGKDTPLTPSSEPRAPAYLSLPVAGDQEQ
QETEQDRRPPSPTCASGPYLARSEKAGSQSTNIKSSSSVSTGLRGWWGRG
SADTIGKKTLAVGDRVSAGEWGEAVVLRVQEADSRVEVAFTRWRGRGFLR
TSAVKPC
back to top
Synonyms
Publications