Naga_100203g2, gene1403 (gene) Nannochloropsis gaditana

Overview
NameNaga_100203g2
Unique Namegene1403
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:667689..671060 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100203g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:667689..671060 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02940NO01G02940Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1453rna1453-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1453rna1453Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1453

>rna1453-protein ID=rna1453-protein|Name=rna1453|organism=Nannochloropsis gaditana|type=polypeptide|length=884bp
MEDTSVTDTTCLSCFRSHVKCEKSIPCRRCQRLNLRCGDGAVGVMSGIGE
GMGQGISPAYSAPTLGDRLQLPGMPSRSPFYDQPSRSGAGGTHRQQVPQH
FQFQHFFQEQEQQQRRQYEGLHAPHGSQHHQGQNLQQQNRLLQQQRYQQP
PQQHQQLQLQSQKQQVQHHHYHQEQLQQPGEEQVGEGGEKEKEERDEGGD
PEEEEKDRHRHRYRQQHQHQRVEELLREEQEQREQGRMDEGQHQREPRHG
HGQQQHEQLPQPHRQAQPKYQHHHQEQDSQREEGEGEEGKDRQHERPTPS
ESSSTPLPDRPIFKVSHPPHFQRCDSQRRQKRDEGTYLNSQLLRQGQQQG
GELSGQKQETNQQPILEHHGHGLIQEQDQPPPARQETSQQLANRHQEKQG
QQALQGLEQVKHGQEQQKPQSYQLYQEQEPHQQQQQQQHHRDGEGGEDDT
VKEDEEAEEGTEKSAASLSSPALPKRHQAPASQSSFRSPSLDAPQSHAQA
GRAWDLHASQRSAPQEAPKPSQPRKRERSALTDPFPCLPSGEGPQDSRAS
GIAGGAGSATNGKESQRSDSACINNSVSESSSERGSAMVTYNNFRGPPAD
ACEVFHSETERVGFLGGGSSTLAGSDHETARSACTKKHNSSARSFASAGG
ENTTLEMTGPFLNLLSSGEVAVERTRHLLTSWHLWSVETRNANAKAHVDQ
EAKEDLEEVAKLVRLSLPSSVAEWVESRGPQVTSGASMALLEEEEQVQSF
LDMCADDDGSAICSAVYCGGRLQLTLNSRFAAMFMTLEEMEMTISQEIVR
PELVWRRLLSPECFVAYNEALCQAYFRGQNLGGEVCEIIKCVDRFGLELP
CFMRVRIFASSHGSITASVILLLPLQLSRLLENM
back to top
Synonyms
Publications